Pseudomonas frederiksbergensis: PFAS1_12175
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Entry
PFAS1_12175 CDS
T04786
Name
(GenBank) tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfk03036
]
PFAS1_12175
Chromosome and associated proteins [BR:
pfk03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PFAS1_12175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
HTH_38
Motif
Other DBs
NCBI-ProteinID:
APV40067
LinkDB
All DBs
Position
complement(2647632..2648531)
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AA seq
299 aa
AA seq
DB search
MERQLDAYCEHLRSERQVSLHTLYAYRRDLDKVLGWCVKQNISSWAALDIQGLRSLIARL
HSQGQSSRSLARLLSAVRGLYHYLNREGLCDHDPANGLAPPKGERRLPKTLDTDRALQLL
EGAVEDDFLARRDQAILELLYSSGLRLSELTGLNLDQLDLADGMVQVLGKGSKTRLLPVG
KKAREALELWLPLRAMTNPADDAVFVSQQGRRLGPRAIQVRVKAAGERELGQNLHPHMLR
HSFASHLLESSQDLRAVQELLGHSDIKTTQIYTHLDFQHLATVYDSAHPRAKRIKGDES
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaacgacaactggacgcttactgcgaacacttgcgcagtgagcggcaggtgtcgctc
cacacgctgtatgcctaccgtcgcgacctcgacaaagtgctgggctggtgcgtcaaacag
aacatcagcagctgggcggccctggacattcagggcctgcgcagcttgatcgcacgcctg
cattcacaaggccaatcgtcccgcagcctggcgcggctgctgtcggcagtgcgcgggctc
tatcactatctgaaccgcgaaggtctgtgcgatcacgacccggccaacggcctggcgccg
ccgaagggcgaacgccggctgccaaaaaccctcgacaccgaccgtgcgttgcaactgctt
gagggcgcggtggaagatgattttctggcgcgtcgggatcaggcgatcctggagctgtta
tattcctcaggtttgcggctgtcggagctgaccgggctcaatctggaccagttggacctg
gccgacggcatggttcaagtgctgggcaagggcagcaagactcgactgttgccagtgggc
aaaaaagctcgcgaagcgctggagttgtggctgccactgcgggccatgaccaacccggcg
gatgacgctgtgtttgtcagccaacaaggccggcgcctcggcccacgggcgattcaagtg
cgggttaaagccgctggcgagcgcgaactgggacaaaacctgcatccgcacatgctgcgg
cactccttcgccagccatttactggagtcctcccaggacctgcgggcggttcaggaattg
ctcggccattcggacatcaaaaccacccagatctacacccacctggacttccaacacctg
gcgacggtttacgacagcgcccatccacgggccaaacgcatcaaaggcgatgagtcatga
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