Pseudomonas frederiksbergensis: PFAS1_13215
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Entry
PFAS1_13215 CDS
T04786
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_13215
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PFAS1_13215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
APV43156
LinkDB
All DBs
Position
complement(2856715..2857635)
Genome browser
AA seq
306 aa
AA seq
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MLIDEELTLKKLEVFLVFMRTGNLARAAAELQTSNVSVHRAIHSLESALRCPLFKHEGRN
LTPLESAYVLEERAQKLIQDVVETVRLTREAAGFSAERFKLGSLYSLTVKTVPQLIMGLK
IRRSELNIDLILGSNFDLLYKLKNMEVDAILVSLDESVNDPDCEQIQLFSDDIFLATPAD
SRFAQRTEVDLAEVRDETFITLTQGFATHQDGNRVFKQAGFEPKVAMQVNDIFTLLSMVS
SGVGYALLPGRIAAVYENRVKLIPLQEKYRLQQHIGVVFLKAKERDPNLLALLAECRMYA
NRNAAV
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgacgaagagttgaccctgaaaaaactcgaggtgttcctggtcttcatgcgc
accggcaacctggcccgcgccgctgccgagttgcaaaccagcaacgtcagcgtgcaccga
gcgatccattccctggaaagcgccctgcgttgcccgctattcaaacacgaaggtcgcaac
ctgaccccactcgaaagcgcttatgtgctggaagaacgcgcgcagaagctgattcaggac
gtggtcgaaaccgtgcgcctgacccgcgaagccgccgggttctccgctgagcgcttcaag
cttggttcgctgtattcactgacggtgaaaaccgtgccgcagctgatcatgggcctgaag
attcgccgcagcgaactcaacatcgacctgatcctcggctcgaacttcgacctgctgtac
aagctcaagaacatggaagtcgacgcgatcctggtgtcgctggacgagagcgtcaacgac
ccggactgcgagcagattcagctgttttccgacgacatctttcttgccacaccggctgat
tcaaggtttgcccaacggaccgaagtcgacctggccgaagtgcgcgacgagacattcatt
acgctgacccagggctttgccacgcaccaggacggtaatcgggtgttcaagcaggcgggg
ttcgaaccgaaggtggcgatgcaggtcaacgacatcttcaccttgctgagcatggtcagc
tcgggcgtgggttatgcgttgctgccgggacggattgcggcggtgtatgagaaccgggtg
aagctgattccgctgcaggaaaagtatcggttgcagcagcacattggggtggtgtttttg
aaggccaaggagcgggatccgaatttgttggcgttgctggcggagtgtcggatgtatgcc
aatcgaaatgctgcggtgtga
DBGET
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