Pseudomonas frederiksbergensis: PFAS1_13535
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Entry
PFAS1_13535 CDS
T04786
Name
(GenBank) AraC family transcriptional regulator
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_13535
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PFAS1_13535
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
DJ-1_PfpI
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
APV40326
LinkDB
All DBs
Position
2929308..2930267
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AA seq
319 aa
AA seq
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MSQDFYFLLMPGFSAIGFISAIEPLRVANRFRGELYRWHVLSADGGAVLASNGMSVNADA
ALEPLKKGATLLVIAGFEPLKFTTPALEHWLRRLDNEGVTLGAIDTGSFILAEAGLLDGH
RLTLHWEAIDAFKESYPQLSVTQELFEIDRRRITSAGGTASIDLMLDLIAQAHGPELAIQ
VSEQFVLGRIRPRKDHQRMEVATRYGISNKKLVHVIGEMEQHSEPPLSTLELAESIKVTR
RQLERLFRLHLNDTPSNFYLRLRLEKARQLLRQTDMSVLEVSIACGFESPSYFTRSYRAK
FERCPREDRRRLGDGRELV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggatttctacttcttgttgatgccgggtttctcggcgattggatttatctcg
gccatcgagccgttgcgggtcgccaatcgttttcgtggcgagctctaccgctggcatgta
ctcagcgcggacggcggggcggtattggccagcaacggcatgtcggtcaacgccgatgcg
gcgctggaaccgctgaagaaaggcgcaaccttgctggtaatcgccggattcgaaccgctg
aagttcaccaccccggccctggagcactggttacgccgcctggataacgaaggcgtgacc
ctcggcgccatcgacaccggcagtttcatcctcgccgaagccggcctgctcgacggccat
cgcctgaccctgcactgggaagccatcgacgccttcaaggagtcctatcctcagctcagc
gtcacccaggagttgttcgagatcgaccgccgacgcatcacctctgccggcggcaccgca
tcgattgatctgatgctcgaccttatcgcccaagcccacggcccggaactggcgatccag
gtcagcgaacaattcgtactcggccgtatccgcccgcgtaaagaccaccagcgcatggaa
gtcgccacgcggtatggcatcagcaacaagaaacttgttcacgtgattggggagatggaa
cagcacagcgagccgccgctgagtacgctggaattggcggaatcgatcaaggtgacgcga
cggcaactggagcgattgtttcgcctgcacctgaacgacacaccgagcaatttctacctg
cgcttgcggctggagaaggcgcggcagttgttgcggcagaccgatatgagcgtgctggaa
gtgagtatcgcctgcgggtttgaatcgccgtcgtacttcacccgcagctatcgggcgaag
tttgagcggtgcccgcgcgaagaccgccgacggttgggggatgggcgagagctggtttga
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integrated database retrieval system
