Pseudomonas frederiksbergensis: PFAS1_13625
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Entry
PFAS1_13625 CDS
T04786
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00260
Glycine, serine and threonine metabolism
pfk00460
Cyanoamino acid metabolism
pfk00630
Glyoxylate and dicarboxylate metabolism
pfk00670
One carbon pool by folate
pfk00680
Methane metabolism
pfk01100
Metabolic pathways
pfk01110
Biosynthesis of secondary metabolites
pfk01120
Microbial metabolism in diverse environments
pfk01200
Carbon metabolism
pfk01230
Biosynthesis of amino acids
pfk01240
Biosynthesis of cofactors
pfk04981
Folate transport and metabolism
Module
pfk_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PFAS1_13625 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PFAS1_13625 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PFAS1_13625 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PFAS1_13625 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PFAS1_13625 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PFAS1_13625 (glyA)
Enzymes [BR:
pfk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PFAS1_13625 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
APV40343
UniProt:
A0A1P8EVT9
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All DBs
Position
2947665..2948918
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALIQPGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTKTGLIDYDEVERLAVECKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVELAGWICDILDNLGDADVEANVAQHVSALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaat
gccgaggagcaacgccaggaagatcacatcgagctgatcgcgtccgagaactacaccagc
aagcgcgtgatggaagcgcaaggcagcggcctgaccaacaaatacgccgaaggctatccg
ggcaagcgttactacggtggctgtgagcacgtcgataaagttgaagcgctggccatcgaa
cgcgccaagcaactgttcggtgccgactacgccaacgtgcagccgcactccggttcttcc
gccaacagcgccgtttacctggccctgatccagccgggcgataccattctcggcatgagc
ctggctcacggcggtcacttgacccacggcgcgaaagtgtcgtcctcgggcaagctctac
aacgccgtgcagtacggcatcgacaccaagaccgggttgatcgactacgacgaagttgaa
cgtctggccgtcgagtgcaagccgaaaatgatcgtcgccgggttctcggcttactccaag
accctcgacttcccgcgcttccggcagattgccgacaaggtcggtgcgctgctgttcgtc
gacatggcccacgtggccggtctggttgccgctggcctgtacccgaatccgctgccgtac
gctgacgtggtcaccaccaccacccacaagaccctgcgcggtccacgtggcgggttgatc
ctggccaagtccaacgaagagatcgagaaaaagctcaacgccgcggtgttccccggcgca
cagggcggcccgctgatgcacgtgatcgctggtaaagcggtgtgcttcaaggaagcgctg
gagcctggtttcaaggcctaccagcaacaagtgatcgacaacgcccaggccatggccggc
gtatttatcaaacgcggctacgatgtagtgtccggcggcaccgataaccacctgttcctg
gtcagcctgattcgtcagggcctcaccggcaaagacgcggatgcagcactcggtcgcgcc
cacatcactgtgaacaagaacgctgtcccgaacgatccacagtcgccgttcgtgacctcc
ggcctgcgcatcggcaccccggcggtgaccactcgcggcttcaaggtgacccagtgcgtc
gagttggccggctggatttgcgacatcctcgacaacctcggcgacgccgatgtcgaggcc
aatgttgcgcagcacgtttcggccttgtgcgcggacttcccggtttatcgctga
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