KEGG   Pseudomonas frederiksbergensis: PFAS1_13625
Entry
PFAS1_13625       CDS       T04786                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
pfk  Pseudomonas frederiksbergensis
Pathway
pfk00260  Glycine, serine and threonine metabolism
pfk00460  Cyanoamino acid metabolism
pfk00630  Glyoxylate and dicarboxylate metabolism
pfk00670  One carbon pool by folate
pfk00680  Methane metabolism
pfk01100  Metabolic pathways
pfk01110  Biosynthesis of secondary metabolites
pfk01120  Microbial metabolism in diverse environments
pfk01200  Carbon metabolism
pfk01230  Biosynthesis of amino acids
pfk01240  Biosynthesis of cofactors
pfk04981  Folate transport and metabolism
Module
pfk_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    PFAS1_13625 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    PFAS1_13625 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PFAS1_13625 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    PFAS1_13625 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    PFAS1_13625 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    PFAS1_13625 (glyA)
Enzymes [BR:pfk01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     PFAS1_13625 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Cys_Met_Meta_PP Beta_elim_lyase DegT_DnrJ_EryC1 Aminotran_5
Other DBs
NCBI-ProteinID: APV40343
UniProt: A0A1P8EVT9
LinkDB
Position
2947665..2948918
AA seq 417 aa
MFSKQDQIQGYDDALLAAMNAEEQRQEDHIELIASENYTSKRVMEAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALIQPGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTKTGLIDYDEVERLAVECKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKSNEEIEKKLNAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKAYQQQVIDNAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVELAGWICDILDNLGDADVEANVAQHVSALCADFPVYR
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgttcagcaagcaagaccagatccagggttacgacgatgcactgctggcggcgatgaat
gccgaggagcaacgccaggaagatcacatcgagctgatcgcgtccgagaactacaccagc
aagcgcgtgatggaagcgcaaggcagcggcctgaccaacaaatacgccgaaggctatccg
ggcaagcgttactacggtggctgtgagcacgtcgataaagttgaagcgctggccatcgaa
cgcgccaagcaactgttcggtgccgactacgccaacgtgcagccgcactccggttcttcc
gccaacagcgccgtttacctggccctgatccagccgggcgataccattctcggcatgagc
ctggctcacggcggtcacttgacccacggcgcgaaagtgtcgtcctcgggcaagctctac
aacgccgtgcagtacggcatcgacaccaagaccgggttgatcgactacgacgaagttgaa
cgtctggccgtcgagtgcaagccgaaaatgatcgtcgccgggttctcggcttactccaag
accctcgacttcccgcgcttccggcagattgccgacaaggtcggtgcgctgctgttcgtc
gacatggcccacgtggccggtctggttgccgctggcctgtacccgaatccgctgccgtac
gctgacgtggtcaccaccaccacccacaagaccctgcgcggtccacgtggcgggttgatc
ctggccaagtccaacgaagagatcgagaaaaagctcaacgccgcggtgttccccggcgca
cagggcggcccgctgatgcacgtgatcgctggtaaagcggtgtgcttcaaggaagcgctg
gagcctggtttcaaggcctaccagcaacaagtgatcgacaacgcccaggccatggccggc
gtatttatcaaacgcggctacgatgtagtgtccggcggcaccgataaccacctgttcctg
gtcagcctgattcgtcagggcctcaccggcaaagacgcggatgcagcactcggtcgcgcc
cacatcactgtgaacaagaacgctgtcccgaacgatccacagtcgccgttcgtgacctcc
ggcctgcgcatcggcaccccggcggtgaccactcgcggcttcaaggtgacccagtgcgtc
gagttggccggctggatttgcgacatcctcgacaacctcggcgacgccgatgtcgaggcc
aatgttgcgcagcacgtttcggccttgtgcgcggacttcccggtttatcgctga

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