Pseudomonas frederiksbergensis: PFAS1_13875
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Entry
PFAS1_13875 CDS
T04786
Name
(GenBank) carbon-nitrogen hydrolase
KO
K01506
5-aminopentanamidase [EC:
3.5.1.30
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00310
Lysine degradation
pfk01100
Metabolic pathways
pfk01120
Microbial metabolism in diverse environments
Module
pfk_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
PFAS1_13875
Enzymes [BR:
pfk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.30 5-aminopentanamidase
PFAS1_13875
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Gene cluster
GFIT
Motif
Pfam:
CN_hydrolase
Trnau1ap
Motif
Other DBs
NCBI-ProteinID:
APV40391
UniProt:
A0A1H4NE59
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All DBs
Position
complement(3006168..3006962)
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AA seq
264 aa
AA seq
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MRVALYQCPPLPLDVAGNLQRLHQLALEAKGADLLVLPEMFLTGYNIGLDAVNVLAEVHN
GESAQQIARIAKTAGIAILYGYPERTEDGQIYNAVQLIDANGERLCNYRKTHLFGDLDHS
MFSAGPDEFPLVELNGWKLGFLICYDLEFPENARRLALAGAELILVPTANMIPYDFIADV
TVRARAFENQCYVAYANYCGNEGEIQYCGQSSIAAPDGSRIAQAGLDEALIVGELDRQLM
VDSRAANRYFLDRRPELYDDLNKR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtagccctttaccaatgtccaccgctgcccctggacgtcgcaggcaacctgcaa
cgtctgcatcaattggcgctggaggccaagggcgcagacttgctggtgctgccggagatg
tttttgaccggttacaacatcggcctcgatgccgttaatgtgctggcagaggtgcacaac
ggtgagtcggcgcagcaaattgcgcgcatcgccaagacggccgggatagccattttgtat
ggttatcccgagcgcaccgaggacgggcagatctacaacgccgtgcagttgatcgacgcc
aatggcgaacgcctgtgcaactaccgcaagactcacctgttcggcgacctcgatcattcg
atgttcagcgccgggccggatgagtttccgctggttgaactcaatggctggaagctcggc
ttcctgatctgctacgacctggagttcccggaaaacgcccgccgcctggccctggccggc
gccgagctgattctggtgccgacagcgaacatgattccttacgacttcatcgccgacgtc
accgtccgcgcccgggctttcgaaaaccagtgctatgtggcttacgccaactattgcggc
aacgaaggcgagatccagtattgcggccagagcagcatcgccgcgccggatggcagccgc
atcgcccaggccggtctcgatgaagcactgattgtcggtgagctggatcgtcagttgatg
gtcgactcccgcgccgccaatcgctacttcctcgatcgtcgccccgagctttacgacgac
cttaacaagcgctga
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