| Entry |
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| Name |
(GenBank) protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
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| KO |
| K09136 | ribosomal protein S12 methylthiotransferase accessory factor |
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| Organism |
pfk Pseudomonas frederiksbergensis
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| Brite |
KEGG Orthology (KO) [BR:pfk00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:pfk03009]
PFAS1_14515
Ribosome biogenesis [BR:pfk03009]
Prokaryotic type
ribosomal protein modification factors
PFAS1_14515
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(3133738..3135942)
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| AA seq |
734 aa
MEIKVNFLDNLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCS
TRNIPTENIRLSQNNIVDPENRYNQIFKIQVELPADISDKDRQGILRSIDRCTVKKVVQA
GPEFVIEEVENLDADAQALLMPASNSEAHTYIAGKDLPLEQTIANMSAILADLGMKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGATKEGALASALGEFIERLNCNFFYNDQFWGED
IANAAFVHYPDERWFKPGRKDELPTEILDEYCLKIYNRDGELRGSHLIDTNSGNEERGIC
SLPYVRQSDGEVVYFPSNLIENLFLSNGMSAGNTLAEAQVQCLSEIFERAVKREIIEGEF
ALPDVPAHVLAKYPAILAGIQALEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNDLPQPTFEGHAVTEPNNFVEHFIDSSGVVSWRF
FSAKSDYEFVEWDFSGQGENSNAEEAATLFGILEGMGKEVYMAVYEHIGAKACRILVPDY
SEIYPADDLIWDNTNKALFFRADILNLHRLNDEELQSLVERLVESELDDYTDITSLIGIE
FDDNTAWGQLTILELKLLIYLALQQYEEAKEAVEMFLQYNDNTVERGLFYQAVNVVLEMK
LDEDLELEDYEANFRRMFGNERTDAAIGSVDGSVRFHGLTPTSLKLEGLDRHLRLIDSYK
KLHSARANVTALFS |
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| NT seq |
2205 nt +upstreamnt +downstreamnt
atggaaatcaaggtcaactttctcgacaaccttcgacttgaagccaagttcgacgacttc
acggtggtggccgatcaacctatccgctacaaaggcgatggctcggcaccgggtccgttc
gactacttcctggcgtcgtcggcgttgtgtgccgcctactttgtgaagttgtattgcagc
acgcgcaatatccccaccgagaacatccgcctgtcgcagaacaatattgttgacccggaa
aaccgttacaaccagatcttcaaaatccaggtcgagctaccggcggacatctccgacaag
gaccgccaaggcatcctgcggtccatcgaccgttgcaccgtgaaaaaagtggtgcaagcc
gggcctgagtttgtgatcgaagaagtggaaaacctcgacgccgatgcccaggcgttgctg
atgcctgcgtccaattcagaggcgcacacctatatcgcgggcaaggatctgccgctggag
caaaccatcgccaacatgtcggccatcctggcggacctgggcatgaagattgaaatcgct
tcgtggcgcaatatcgtgcccaacgtgtggtcgctgcatatccgcgacgcgcactcgccg
atgtgctttaccaacggcaagggtgcgaccaaggaaggcgcgttggcgtcggcgttgggc
gagtttatcgagcgactcaactgcaacttcttctacaacgaccagttctggggcgaagac
atcgccaacgctgcgtttgtgcactacccggacgaacgctggttcaagcctggccgtaaa
gatgagctgccgactgagattctcgacgagtattgcctgaagatttacaaccgcgacggc
gagctgcgtggctcccatctgatcgataccaactcgggcaatgaagagcgcggcatctgt
tcgttgccgtacgtgcgccagtcggacggcgaagtggtgtacttcccgtccaacctgatt
gaaaacctgttcctgagcaacggcatgagtgccggtaatacactggccgaagcccaggtg
cagtgcctgtcggagatcttcgagcgtgcggtaaagcgcgaaatcatcgaaggcgaattc
gcactcccggatgtgccggcccacgtgctggcgaagtaccccgccatactggccggtatt
caggcgctggaagagcagggattccccgtgttggtgaaggatgcgtccctggggggtgag
ttcccggtgatgtgcgtcacgttgatgaacccgcgtaccggcggtgtgttcgcctcgttc
ggcgcgcacccgagcctggaagtggcgctggaacgcagcctgaccgaattgttgcagggc
cgcagcttcgaaggcctcaacgacctgccccagccgacgtttgaaggccatgcggtgacc
gagccgaacaacttcgtcgagcactttatcgactccagcggcgtggtgtcgtggcgcttc
ttcagtgccaaatcggattacgaattcgtggagtgggacttctccggccagggtgaaaac
tcgaacgcagaggaagccgcgaccttgttcggcattctcgaaggcatgggcaaggaagtg
tacatggcggtctacgagcatatcggcgccaaggcctgccgcatcctcgtaccggactat
tcggaaatctatcccgcggatgatctgatctgggacaacaccaacaaagcgctgttcttc
cgtgccgacatcctcaacctgcatcgcctgaacgatgaagaactgcaatcgctggttgaa
cgtctggtggaaagtgagctggacgactacaccgacatcacgagcctgatcggcatcgaa
tttgacgacaatacggcgtggggtcagctgacgatcctggagttgaagctgctgatttat
ctcgccttgcagcaatatgaagaggcgaaagaggcggtagaaatgttcctgcagtacaac
gacaacacggttgaacgcggcttgttttaccaagcggtcaatgtggtgctggagatgaag
ctggacgaagacctggaactggaagactacgaggccaatttccgccggatgtttggcaac
gagcgcacggatgcagcgatcggctcggtggacggcagcgtgcgtttccatggcttgacg
ccgaccagcttgaaactggaggggctcgacaggcacctgcggttgatcgatagctacaag
aaactgcactcggcaagggccaacgtgaccgcgttattcagttaa |
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