Pseudomonas frederiksbergensis: PFAS1_14680
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Entry
PFAS1_14680 CDS
T04786
Name
(GenBank) cobalamin-binding protein
KO
K06858
vitamin B12 transport system substrate-binding protein
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PFAS1_14680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_14680
Transporters [BR:
pfk02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Vitamin B12 transporter
PFAS1_14680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_2
MADF_DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
APV40537
LinkDB
All DBs
Position
3168860..3169660
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AA seq
266 aa
AA seq
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MRPVWLAVLLLAVSGPAAAVERVVSLAPSLSEIVVELGSADLLVGVLDAGERPAELEDLP
SVGRYGQLDMEQLLSLKPDLLLLWPGSVGPAQREQLKRLNIPTYVAEPHNLEQLTAQIEA
IASQLGRPERGVSLAEKLRQRLDSLRQRYRRDVPLRVYYQVWDRPLYTVGGGQIISDALE
VCGARNVFADLTLPAPQVSIEAVLQRNPEVILASDQAQLDAWKAWPQVAAVVQGQLLLVT
DKGLERPSGQMIEATAKLCQLISPSR
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccgtctggctggcggttttgctgctggccgtcagtggcccggcggctgcggtc
gaacgcgttgtcagcctcgctccgtcgctctctgaaatcgttgttgaactgggttcggct
gacctgctggtgggtgtgctggatgccggtgagcgtcctgccgagcttgaagatctgcct
tcggttggccgctatggtcagctggacatggagcaattgctcagtctcaagcccgatctg
ttgttgctctggcccggcagcgttggcccggcccagcgtgaacagctcaaacggttgaac
atcccgacctacgtggcggaaccgcacaacctcgaacaactcactgcgcagattgaggcg
atcgcctcacaactcggccgtccagagcgtggtgtttcattggctgaaaagttgcgtcag
cggctggattcgctgcgccagcgttatcgtcgagatgtgccattgcgagtgtattatcag
gtctgggatcggccgctttacaccgttggaggcgggcagatcatcagcgatgcgcttgaa
gtgtgcggggcgcgcaatgtgtttgccgacctcacgctaccggcgccgcaggtcagtatt
gaagcggtattgcagcgcaatcccgaggtgatcctggctagtgatcaggcgcagcttgat
gcgtggaaagcctggccgcaggttgcggcggtggtgcaggggcaattgctgttggtaacg
gataaaggcctggagcggccgagtgggcaaatgatcgaagcgacggccaaactctgtcag
ctgatttcgccttcacgctga
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