Pseudomonas frederiksbergensis: PFAS1_14685
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Entry
PFAS1_14685 CDS
T04786
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_14685
Transporters [BR:
pfk02000
]
Other transporters
Pores ion channels [TC:
1
]
PFAS1_14685
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
APV40538
LinkDB
All DBs
Position
complement(3169775..3171658)
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AA seq
627 aa
AA seq
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MKLSRLALTLTLLPAGQLLADTFERDQALKLPDVLISANRQVEARNDSSAANTVFTREDI
DRLQPNSVTDLLRRVPGVQVGQTGGRGSLPGIYIRGTKSAQSLVLVDGQRIGNSTSGDSN
LQHINIEQVERVEVLRGSRSVIYGSDAIGGVIQIFTRRGGEQGLQPRLYVGFGSNQTWER
SLGLSGGDEKTRFNLGASLDETAGIDRTHESYPSDGDHDEYRNKSVSLSLSHALTEDIEI
GANVLDNRGKSELDSPFGRYDFDTKQSLQQQLYSDFTVSGVSSYVDARINDLWKTRVEFG
HSENREKTIDKLSDERSVFNTYRDSVNWQNDLTLDERNSLILGGDWYEDRVNSSTPFDED
SRWNRAAFIQHHYQADSFSTELGLRRDQNQQFGGQNSWSGTFTLPLNPDNDVLLTYSEGF
RAPTFNDLYYPDFSNPDLKPETSKSYELQWRSQLTDTARLEASLYRTDLEDAIIFGSNNR
PQNVAQARINGFEAALKQELFGWQSNLGVAIIDPRDRDSGHTLARRARRTLSLDLDRQFD
RLGLGASWQAVSSSYDDENNQQPLGGYALLGLRSSWELNREIKLELKVDNLLDKGYSRAL
YSHEGSQYGYREEGRAWMFGVTWTPEL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctcccgcctcgccctgacgctgacccttctgccggccggccaactgctggcc
gacaccttcgaacgcgaccaggccctgaaactgcccgacgtgctgatcagcgccaaccgt
caggtcgaagcgcgcaatgacagcagcgccgccaacaccgtgttcacccgcgaagacatc
gatcgcctgcaaccgaacagcgtgactgacttgctgcgtcgtgtgccgggcgtacaggtc
gggcaaaccggcgggcgcggcagtctgccggggatttacattcgcggcaccaaatcggcc
cagagcctggtgctggtcgacggccagcgcatcggcaactccacctccggcgacagcaac
ctgcaacacatcaacattgaacaggtcgagcgcgtggaagtgttgcgcggctcccgctcg
gtgatttatggcagcgatgcgattggcggggtgatccagatcttcacgcggcgcggcggc
gagcaaggcctgcaaccacggctgtatgttgggtttggcagtaatcagacgtgggagcgt
agccttgggttatcgggtggtgacgagaaaacccgcttcaatctgggcgccagcctcgat
gaaaccgccgggatcgaccggacccacgagtcgtatcccagcgatggcgatcacgatgaa
taccgcaataagtcggtgagtttgagcctgagccatgccctcaccgaggacatcgaaatc
ggcgcgaacgtgctggataaccgtggtaaaagtgagctcgatagcccgtttggccgctac
gatttcgatacgaagcaatcacttcagcagcagctttatagcgacttcaccgttagcggc
gtcagcagctatgtcgatgcgcgcatcaacgacctgtggaaaacccgcgtagagttcggc
catagcgagaaccgcgaaaaaaccatcgacaagctcagcgatgaacgcagcgtgttcaac
acctaccgagattcggtgaactggcagaacgacctgacccttgacgagcgcaacagcctg
atccttggcggcgactggtatgaggaccgggtcaacagcagcacgccattcgacgaggac
agccgctggaaccgtgccgcgttcattcaacatcattaccaggcggacagtttctccacc
gaactgggcctgcgccgcgatcagaaccagcagttcggtggccagaacagctggagcggc
accttcactctgccgctgaatccggacaacgatgtattgctgacctacagcgaaggcttc
cgcgcgccgacgttcaatgacttgtattaccccgatttcagtaatccggatctgaaaccc
gagacgtcgaaaagctacgagctgcaatggcgcagtcaactgaccgacaccgctcgcctg
gaagcttcgctttaccgtacggacctggaagacgcgattattttcggcagtaacaaccgg
ccgcagaacgtcgcgcaggcacgcatcaacggtttcgaagcggcgttgaaacaggaactg
ttcggctggcagagcaacctcggcgtagcaatcatcgacccgcgggatcgcgacagcggc
cacaccctggctcggcgcgcgcggcggaccttgagcctggatctggatcggcagttcgac
cggctagggctcggcgccagctggcaagcggtgagcagcagctatgacgatgagaacaat
cagcagccgttgggcgggtacgcgttgctggggttgcgcagcagttgggaattgaatcgt
gagatcaagcttgagctgaaggtcgataacctgctggacaagggttacagccgggcgctg
tacagccatgaaggtagccagtatgggtatcgcgaggaaggtcgggcgtggatgtttggg
gtgacctggacaccagaactttag
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