Pseudomonas frederiksbergensis: PFAS1_15750
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Entry
PFAS1_15750 CDS
T04786
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFAS1_15750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfk03019
]
PFAS1_15750
Enzymes [BR:
pfk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PFAS1_15750
Messenger RNA biogenesis [BR:
pfk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PFAS1_15750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
APV40736
LinkDB
All DBs
Position
complement(3398615..3400015)
Genome browser
AA seq
466 aa
AA seq
DB search
MLKKLFQSFRSPKRHTQHIRSTPEVLNSGQHSLQKAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMLLGITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAN
HPQNDEEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERILDYANGV
HDIRNHLIRLIGDPKQRYQEDPVRMLRAVRFAAKLNFGIEKHSAVPIRELAPMLREIPSA
RLFEEVLKLFLSGHAADTFEMLVDLQLFDPLFPASAEALEYNPTYTHTLISDALINTDLR
IKQNKPVTPAFLFAALLWPALPARVLRLQERGMPPIPAMQEAAHELIAEQCQRIAIPKRF
TMPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRESAGEQTDGLGEWWTDYQD
ANDSERRDMIRDLSGKDDGTGAPRKRRRSGGAKRKRTAGAPSATGE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgttccagtcattccgttctcccaagcgtcatacgcaacacattcgc
agtacgcctgaagtgctcaacagcggccaacattcgctgcaaaaggcccaattcagtcgc
tacgcggtgaacattgtcgaacgcctgcagaacgccggttatcaggcttacctggtcggc
ggctgcgtgcgtgacatgctgctcggcatcacgccaaaagatttcgacgtcgccaccagt
gccacacctgaacaggtgcgggccgaattccgcaacgcgcggatcatcggtcgccgcttc
aagctggtgcacattcactttggccgcgaaatcattgaagtcgcgaccttccgcgccaat
cacccgcaaaatgatgaagaggaagacagcaaccagtcttcccgcaacgagagcgggcgc
atcctgcgcgataacgtctatggcacgctggaagaagacgcgcaacgccgcgacttcacc
atcaacgccttgtattacgatccggtcagcgagcgcatcctcgattacgccaacggcgta
cacgacatccgcaatcacctgatccgcctgatcggcgacccgaagcaacgctaccaggaa
gatccggtacggatgctgcgagccgtgcgtttcgccgccaagctgaatttcggcatcgaa
aaacacagcgccgtgccaatccgtgaactggcgccgatgctgcgcgagattccatcggct
cgcctgttcgaagaagtgctcaagctgttcctttccggccacgccgcggacaccttcgag
atgctggtcgacttgcagctgttcgatccgctgttcccggccagtgccgaggctctggaa
tacaacccgacctacacccacacgctgatcagcgatgcgttgatcaacaccgacctgcgg
atcaagcagaacaaaccggtgaccccggcgttcctgtttgcggcgctgctgtggcctgcc
cttcctgctcgggtcctgcgcctgcaagaacgtggcatgccgccgattcctgcgatgcag
gaagccgcccatgaactgattgccgaacagtgccagcgcatcgcgattccgaaacgcttc
accatgccgatccgcgagatctgggacatgcaggagcgtctgccacgccgcagcggcaag
cgcgccgacctgttgctggacaacccgcggttccgtgccggttacgacttcctgctgctg
cgcgaaagcgccggtgagcagaccgacggcctgggcgaatggtggacggattatcaggac
gccaacgacagcgaacgtcgtgacatgatccgcgacctcagcggcaaggatgacggcacc
ggcgccccacgcaagcgtcgccgcagcggtggcgccaagcgcaaacgcaccgccggcgca
ccgagcgctacgggcgagtaa
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