Pseudomonas frederiksbergensis: PFAS1_16005
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Entry
PFAS1_16005 CDS
T04786
Name
(GenBank) D-alanine--D-alanine ligase A
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00470
D-Amino acid metabolism
pfk00550
Peptidoglycan biosynthesis
pfk01100
Metabolic pathways
pfk01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFAS1_16005
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PFAS1_16005
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PFAS1_16005
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfk01011
]
PFAS1_16005
Enzymes [BR:
pfk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
PFAS1_16005
Peptidoglycan biosynthesis and degradation proteins [BR:
pfk01011
]
Precursor biosynthesis
Amino acid ligase
PFAS1_16005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
CPSase_L_D2
ATPgrasp_ST
RimK
GARS_A
Motif
Other DBs
NCBI-ProteinID:
APV40780
LinkDB
All DBs
Position
3454069..3455163
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AA seq
364 aa
AA seq
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MSKLRVGIIFGGRSAEHEVSLQSAKNIVDALDRSRFEPVLIGIDKQGHWHLNDPSNFLLN
QENPALIALNQSNRELAVVPGKASQQLVETSSQEMLGHVDVIFPIVHGTLGEDGCLQGLL
RMADLPFVGSDVLGSAVCMDKDISKRLLRDAGLAVTPFVTLTRATAARTGFAEVQGKLGL
PLFVKPANQGSSVGVSKVNDETEYAAAVELALGFDEKVLVESAVRGREIECAVLGNEDAI
ASGCGEIVVRSGFYSYDSKYIDAQAAEVLVPANISIEASERIRALAVEAFQVLGCSGLAR
VDVFLTESGEVLINEINSLPGFTRISMYPKLWQATGMTYSELVSRLIDLALEKHQARQAL
KISR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaactgcgggtaggtattatttttggcggccgttcggctgaacacgaagtgtcg
ctgcaatcggcgaaaaacatcgtcgatgccctggaccgttcgcgcttcgagccggtgctg
atcggcatcgacaagcaaggccactggcacctgaatgacccttcgaacttcctgctcaac
caggaaaacccggcgctgatcgcccttaatcaatccaaccgcgaactggccgtcgtgccg
ggcaaggccagtcagcagttggtggaaacctccagtcaggaaatgctgggacacgtcgat
gtgatcttcccgatcgtccacggcaccctgggcgaagacggttgcctgcaaggcttgctg
cgcatggccgatctgccgtttgtcggctccgatgtgcttggttcggccgtctgcatggac
aaggacatcagcaagcgcctgctgcgtgacgccgggttggcggtcacgccgttcgtcacc
ctgacccgcgccaccgcagcgcgcaccgggttcgccgaggtgcaaggcaaactcggcttg
ccgctgttcgtcaaaccggcgaaccagggatcttccgtgggcgtcagcaaggtgaatgat
gaaaccgagtacgcggcagcggtggagctggccttggggttcgatgagaaagtcctggtc
gagtccgccgtccgtggccgcgagattgagtgcgcggtgctcggcaacgaagacgccatc
gccagcggttgcggcgaaatcgtggtgcgtagcgggttttattcctacgacagcaaatac
atcgacgctcaagcggcggaagtgttggtgccggcaaacatcagcatcgaagccagtgag
cgcatccgtgccctggccgtcgaggcgtttcaggtgctgggctgttccgggctggcgcgg
gtcgacgtattcctgaccgagagtggcgaagtgctgatcaatgagatcaactcgttgccc
ggattcacccgcatcagcatgtaccccaagctatggcaggccactggtatgacttacagc
gagttggtcagccgtttgatcgacctcgcgctggagaagcatcaggcgcgacaggcgctg
aagatctctcgctag
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