Pseudomonas frederiksbergensis: PFAS1_16150
Help
Entry
PFAS1_16150 CDS
T04786
Name
(GenBank) hypothetical protein
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
PFAS1_16150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_15
AAA_21
AAA_23
SMC_N
DUF2813
AAA_29
AAA_27
Motif
Other DBs
NCBI-ProteinID:
APV40802
LinkDB
All DBs
Position
complement(3486731..3488518)
Genome browser
AA seq
595 aa
AA seq
DB search
MRLKSLKIKNFRSYQEQKEITFNDMTALIGRNDVGKTTILDALGIFFGHKLCKYEPGDKC
VYAGENEDVAITCTFDELPDELVLDATSTTSLAGEYLLTAEGTLSLSRVFSKGKGAGAFV
ATCLHPSAKNAKGILLKKNEELKSLAQSLNIQAEDNRSNVSLRSAIYIATGDLKLKEQNV
SLNKEDGKEILEKIQNHLPHFALFRADRPSTDEESEVQDPMKVAISQALEDIAPQLEAVK
DQVRDRALAVANNTLSHLSDLDPELALSLTPEFKADPKWEGIFKLSLAGEDNIPINKRGS
GVRRLVLISFFKAEAERIKREYRDRGVIYAIEEPETSQHPDKQKLLVEAFSEMAEKKGCQ
IIISTHVPALAEQLPVETLRHIYRDHEGEITINSSSDGMYRSIAKDLGVLPDSRAQVIVC
VEGPNDIAFFKNLSSSLASEGVVVPDFDNDPRIVLLPLGGDTLRDWVNGHYLKNIGKPEV
HIYDRDTNTPPKYQATADAVNARNDGSIAFITSKREAENYLHVDAIQESLNIRIQFTDTC
DVPTLVGNAMGVNDRTAKRRLNKNTAKHMTMQRLAEQDPHSEILGWFGAIMDRCR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgagattaaaatcgttaaaaatcaaaaatttcagatcataccaagaacaaaaagaaata
acatttaatgatatgaccgcgctaattggtcgaaacgacgttggaaaaacaactatatta
gatgccttaggtatatttttcggccataagttatgcaaatatgaacctggagacaagtgc
gtatatgctggcgagaatgaagatgttgcaataacctgcaccttcgacgagctgccagac
gagcttgtattagatgctacttctactacaagcttggcaggagagtacttgctgacagca
gagggcacactttctctatcgagagtattcagcaagggtaaaggtgccggggcttttgta
gctacatgcttgcatccgtcagccaaaaacgcgaagggaattctacttaagaaaaatgaa
gaactcaaatccctagcgcaatccctgaacatccaagccgaagacaatagatccaatgtc
agcctgaggtctgcaatttacatagcaactggcgacctcaaattaaaagagcaaaacgta
tcgttaaacaaagaagacgggaaagaaatattagaaaaaatccagaatcacctccctcac
ttcgctctttttagagctgacagacctagcactgacgaagaatctgaagttcaagacccc
atgaaagtagcaatatctcaggcgcttgaggatattgcacctcagctcgaagctgttaaa
gatcaggtaagagacagagcactagcagttgccaacaacacgctcagccaccttagtgat
ctcgaccctgaactggctctatcgttaactcctgaattcaaagctgaccccaagtgggag
ggaatatttaaattatccctagcgggtgaggataatattccaatcaacaaacgaggaagc
ggagttaggcgcttagtcttaattagctttttcaaggccgaagcagaaagaataaaacgc
gagtaccgagaccggggagtcatttatgcaatcgaagaaccggagacatcacagcaccct
gacaagcagaaattacttgttgaagcattttcggagatggcggaaaaaaagggctgccag
ataataatttcaacacacgtaccggcacttgccgaacagctaccagtcgagactctcagg
cacatttatcgagatcatgaaggcgaaataacaataaattctagctcagacggaatgtat
cgctctatcgcaaaagacttgggcgtattacctgacagtagagcacaggttattgtctgt
gtagagggccccaatgatattgctttttttaaaaacctttcgtcatcgcttgcttctgaa
ggagtcgttgtacccgacttcgataatgacccaaggatagtactgctaccactaggggga
gatacacttcgagactgggttaatgggcattacctaaaaaatatcggaaaaccagaggtc
catatatatgaccgagataccaacaccccaccaaagtatcaagctaccgccgatgcagta
aacgcacgaaacgacggctctattgcatttataacgagcaaacgtgaagcagaaaactat
ctgcacgttgatgcgatccaagagagcctaaacatacgaatacagttcactgatacctgc
gacgtgcccaccttagtggggaacgctatgggagtaaacgatagaacggccaagcggagg
ttgaacaagaatacagctaaacacatgacgatgcagcgcttagctgagcaagatccccat
agcgaaatacttggttggtttggggccatcatggaccgctgccgttag
DBGET
integrated database retrieval system
