Pseudomonas frederiksbergensis: PFAS1_16440
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Entry
PFAS1_16440 CDS
T04786
Name
(GenBank) adhesin
Organism
pfk
Pseudomonas frederiksbergensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1302
Motif
Other DBs
NCBI-ProteinID:
APV40856
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All DBs
Position
3542223..3544160
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AA seq
645 aa
AA seq
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MTSVNQFWRRAKLPLAVSLASSLAGPAFGVSFNVGEIEGQFDSSLSIGSSWSTQSPNKNL
IGVNNGGRGLSQTSDDGHLNFKSGETFSKIFKGIHDLELKYGDTGVFVRGKYWYDFELKD
ESRPFKDISDNNRKEGAKSSGGQILDAFVYHNYAVADQPGSVRLGKQVVSWGESTFIGGG
INSINPIDVSAFRRPGAEIKEGLIPVNMFYVSQSLTENLSTEAFYQLEWDQTVTDNCGTF
FSQPDVISDGCDNNLAVLRTRNGLNSALTAAGLPASLRNASINTLAARGVTWGDPDEGVI
VRRGPDRDARDSGQFGVSFKYMFDPLDTEFGAYFMNYHSRAPIFSGKGAPASAYSAAGLV
GSLRAAGVPAGVAASLAPTLLPLNVAGNSSYYVEYPEDIRLYGLSFSTTLPTGTAWSGEV
SYRPNAPVQLNTTDILFSGLTPLNPNVSVLQGAPGEDQKGYRRKEVTQLQTTLTHFFDQV
MGAERLTLVGEVGFTHVGGLESTNKARYGRDPSYGPGPLPGGQCQTLNSGTLAGGPQNNV
SRYCENDGFTTANSWGYRGRAIWEYNDVFAGVNLKPNVAWSHDVEGYSPGPGGNFEEGRK
AVSLGVDAEYQNTYTASLAYTNFFDGKYTTVDDRDFVALSFGVNF
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagtaaaccagttctggcgccgggcaaaactgcccctggcggtcagtcttgcc
tcttcgctcgccgggccagcattcggcgtcagtttcaacgttggggaaatcgaaggtcag
ttcgactcgtccctgtcgatcggttccagctggtcgactcaaagtcccaacaagaacctc
atcggcgtcaacaacggcggccgtggcctgtcccagacttcggacgacggtcacctgaac
ttcaagagtggcgaaacgttctccaagatcttcaagggtatccatgaccttgaattgaaa
tatggcgacaccggcgttttcgtccgtggcaaatactggtacgactttgaactcaaggac
gaaagccgtccgttcaaggacatcagcgacaacaaccgcaaggaaggcgccaagtcctcc
ggcggtcagatcctcgacgctttcgtctaccacaactacgccgttgccgatcagccgggc
tccgtgcgcctgggcaagcaagtagtaagttggggtgaaagtaccttcatcggcggtggt
atcaactcgatcaacccgatcgacgtgtccgcgttccgtcgtcccggtgccgagatcaag
gaaggcctgatcccggtcaacatgttctacgtctcgcagagtctcaccgagaacctctcg
accgaagctttctaccagctcgaatgggaccagaccgtcaccgacaactgcggcaccttc
ttctcgcaaccagacgtgatttcggatggctgcgacaacaacctggccgtactgcgcacc
cggaacgggctcaacagcgcattgacggcggcggggctgccggcttcgttgcgtaatgcc
agcatcaacaccctggctgccaggggcgtcacctggggagaccctgatgaaggcgtaatc
gttcgtcgcggtccggatcgcgatgcccgtgacagcggtcaattcggcgtgtccttcaaa
tacatgttcgatccgctggacaccgagttcggcgcctacttcatgaactaccacagccgt
gcgccgattttcagcggcaaaggtgctccggcgagcgcttacagcgcggcgggcctggtg
ggttcactgagggctgcgggggttccggccggtgtcgcggcaagcctggcaccgaccttg
ttgccattgaacgtggccggtaactccagctactacgtcgagtaccctgaagatattcgc
ctgtatggcttgagcttctccacgacgctaccgacaggtactgcgtggagcggtgaagtc
agctaccggccgaatgctcccgttcagctcaacaccaccgacattctgttttccggtctg
acgccgctgaaccctaacgtttccgtgctccagggggcgccaggggaggatcaaaaaggc
tatcgccgcaaggaagtgacccagctccagacgacccttactcacttcttcgaccaggtg
atgggcgccgagcgactgaccctggtgggcgaggtcggctttactcacgttggtggtctg
gaaagcactaacaaagcgcgttacggccgtgacccgagctacggccccggtccattgccc
ggtggtcagtgccagacattgaacagcggcaccctggccggcggaccacaaaacaacgtc
agtcgctactgcgaaaacgacgggttcaccaccgcaaactcctggggctaccgtggtcgt
gccatctgggaatacaacgacgtgttcgccggtgtgaacctcaagccgaacgtggcctgg
tctcatgacgtggaaggctactcgcctggtcctggcggcaacttcgaggaaggccgcaaa
gcggtgagcctgggtgtcgatgccgagtaccagaacacctacaccgcgagcctggcttac
accaacttctttgatggcaagtacaccaccgtcgatgaccgcgatttcgttgcgctcagc
ttcggcgtgaacttctaa
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