Pseudomonas frederiksbergensis: PFAS1_16900
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Entry
PFAS1_16900 CDS
T04786
Name
(GenBank) lytic transglycosylase F
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfk01011
]
PFAS1_16900
Enzymes [BR:
pfk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PFAS1_16900
Peptidoglycan biosynthesis and degradation proteins [BR:
pfk01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PFAS1_16900
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
NMT1
Motif
Other DBs
NCBI-ProteinID:
APV40944
LinkDB
All DBs
Position
complement(3641795..3643255)
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AA seq
486 aa
AA seq
DB search
MFSPTALRPRFAKWLIATGLFLVLSGCVDKPNTLERVKEDGVLRVVTRNSPATYFQDRNG
ETGFEYELVKRFADDLGVELKIETADNLDDLFNQVGKPNGPVIAAAGLVSSEARKKQVRF
SHSYLEVTPQVIYRNGQSRPTDAKDLVGKKIMVLKGSTHAEQLAELKKKYPGIEYEESDA
VEVVDLLRMVDEDQIDLTLVDSNEVAMNQVYFPKVRVAFDLGDASNQSWAVAAGDDNSLL
NEINDYLDKVKKNGTLQRLKDRYYGHVDVLGYMGATTFAQHLQQRLPKYEQHFKTYAKKE
KVDWRLLAAVGYQESLWQAAVTSKTGVRGLMMLTQNTAQAMGVSNRLDPKQSIMGGAKYL
AYMKEQLDESIQEPDRTWFALAAYNVGSGHLDDARKLAAKEGLNPDKWLDVKKILPRLSE
KKWFSKTRYGYARGGEPVHFVANIRRYYDILTWVTQPQLEGNQVAEGNLHVPGVDKTKPN
QETPQL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgttttccccaacggctttgcgtccgcggttcgccaaatggctgatcgcaaccggactc
ttcctggtgctcagtggctgtgttgataaacccaacacgctggagcgcgtaaaggaggat
ggcgtgctgcgggtggttacccgaaacagccccgccacctactttcaggatcgcaacggt
gaaaccggcttcgaatacgagctggtgaagcgcttcgccgacgatctgggggtggaactc
aaaatcgaaaccgccgacaacctcgacgacctgttcaatcaggtgggcaagcccaacggc
ccggtgatcgctgctgccggcctggtcagcagcgaagcacgtaaaaagcaggtgcggttt
tcccactcctatctcgaagtcaccccacaggtcatctatcgcaacggccaatcgcgaccg
accgacgcgaaggacctggtgggcaagaagatcatggtgctcaagggcagcacccacgcc
gagcaattggcggagctgaaaaagaaatatcccggcatcgaatacgaagagtccgacgct
gttgaagtcgtcgacttgctgcgcatggtcgatgaagatcagattgacctgaccctggtg
gactcaaacgaagtcgcgatgaaccaggtctatttccccaaagtgcgggtagccttcgac
ctcggtgacgccagcaaccagagctgggcggtggccgctggcgacgacaacagcctgctc
aacgaaatcaacgactacctcgacaaagtgaagaaaaacggcaccctgcaacggctgaaa
gaccgctattacgggcacgtcgatgtactgggttacatgggcgccaccaccttcgcccaa
cacttgcagcaacgcctgcccaaatacgaacagcacttcaagacgtacgccaagaaagag
aaagtcgattggcgcttgctggccgcggtcggctatcaggaatcgctgtggcaagcggcc
gtcacgtcgaagaccggcgtgcgcggcctgatgatgctgacccagaacactgcgcaggcc
atgggcgtgtccaatcgactggaccccaaacaaagcatcatgggcggcgccaagtacctg
gcctacatgaaggaacagctggacgagtcgatccaggagccggatcgcacctggtttgca
ctggcggcctacaacgttggcagtggtcatctggatgacgcgcgcaaactggcggccaag
gaaggtctgaatccggacaagtggctggatgtgaaaaagatcctgccgcgtttgtccgag
aagaagtggttcagcaaaacccgttacggctacgcccgtggcggcgaacccgttcacttc
gtggcgaacatccgccgctactacgacatcctgacgtgggtgacgcagccgcagctggaa
ggcaatcaggtcgccgagggcaacctgcatgtgccgggggtcgacaagaccaagccgaat
caggaaaccccacagctttaa
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