Pseudomonas frederiksbergensis: PFAS1_17170
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Entry
PFAS1_17170 CDS
T04786
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFAS1_17170
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfk01007
]
PFAS1_17170
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfk03016
]
PFAS1_17170
Enzymes [BR:
pfk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PFAS1_17170
Amino acid related enzymes [BR:
pfk01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PFAS1_17170
Transfer RNA biogenesis [BR:
pfk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PFAS1_17170
Prokaryotic type
Other AARSs
PFAS1_17170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
APV40995
UniProt:
A0A1P8EXP8
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All DBs
Position
3703439..3704941
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AA seq
500 aa
AA seq
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MSDLELDPQALQQEENSLIALRKEKLAAERAKGNAFPNDFRRDNYCEDLQKQYADKTKEE
LAEAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLSEETLASVKTWDMGDIIAAV
GTLARSGKGDLYVEMTEVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEEVRQTFR
VRSQVIAHIRSFLMQRDFLEVETPMLQTIPGGAAAKPFETHHNALDLEMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLV
LGSTDVPYGDKVFHFGEPFVRLSVFDSILKYNPELTADDLTDIEKARAIAKKAGAKVLGF
EGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRNDDNPNVTDRFELFIGGREIAN
AYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctagaactcgacccgcaagccctgcaacaggaagaaaactccctgatcgcc
ctgcgcaaggaaaagctggctgccgagcgcgccaagggcaatgccttcccgaacgacttc
cgccgcgacaactactgcgaagacttgcagaaacagtacgcggacaagaccaaggaagag
ctggcagaggctgcgatcccggtcaaggttgccggtcgcatcatgctcaaccgtggctcg
ttcatggtgatccaggacatgaccggtcgcattcaggtctacgtcaaccgtaaaaccctt
tccgaagaaaccctggcctcggtgaaaacctgggacatgggcgacatcatcgcagccgtt
ggcaccctggcccgttccggcaagggcgacctgtacgtcgaaatgactgaagtgcgcctg
ctgaccaagtccctgcgtccgctgccggacaaacatcacggcctgaccgacactgaacag
cgctatcgccagcgttacgttgacctgatcgtcaacgaagaagtgcgccagactttccgc
gtacgttcgcaagtgattgcgcacatccgcagcttcctgatgcagcgcgacttcctggaa
gtggaaacgccgatgctgcaaaccattccaggtggcgcggcagccaagccgttcgagact
caccacaacgcgctggacctggaaatgttcctgcgtatcgcgcctgagctgtacctcaag
cgtctggtggtcggtggttttgaaaaggtcttcgagatcaaccgcaacttccgtaacgaa
ggcgtttcgactcgtcacaaccctgaattcaccatgttggagttctatcaggcttacgcc
gactacgaagacaacatggacctgaccgaagaactgttccgcgaactggcgcagctggtt
ctgggcagcaccgacgtgccgtacggcgacaaggtgttccacttcggcgaaccgttcgtg
cgtctgtcggtgttcgactcgatcctcaagtacaaccctgagctgaccgctgacgacctg
actgatatcgagaaggcccgcgccatcgccaagaaggccggcgccaaggtgctgggcttc
gaaggtctgggcaaattgcaggtgatgattttcgaagaactggtcgagcacaagctggag
cagccgcacttcattactcaatacccgttcgaagtgtcgccgctggcccgtcgtaacgac
gacaacccgaacgtcaccgaccgtttcgaactgttcatcggtggccgcgaaatcgccaac
gcctactccgagttgaacgacgcggaagaccaggccgagcgcttcatggcgcaggtggct
gacaaggacgccggcgacgacgaggccatgcactacgacgccgacttcgttcgcgcgctg
gagtacggcatgccgccaacggccggtgaaggtatcggcatcgaccgtctggtgatgctg
ctgaccaactccccgtcgatccgcgacgtgatcctgttcccgcacatgcggcctcaagcg
taa
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