Pseudomonas frederiksbergensis: PFAS1_17315
Help
Entry
PFAS1_17315 CDS
T04786
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00300
Lysine biosynthesis
pfk01100
Metabolic pathways
pfk01120
Microbial metabolism in diverse environments
pfk01230
Biosynthesis of amino acids
Module
pfk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PFAS1_17315
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfk01002
]
PFAS1_17315
Enzymes [BR:
pfk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PFAS1_17315
Peptidases and inhibitors [BR:
pfk01002
]
Metallo peptidases
Family M20
PFAS1_17315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
APV41024
LinkDB
All DBs
Position
complement(3733883..3735034)
Genome browser
AA seq
383 aa
AA seq
DB search
MTAHADLSPTLQLAIDLIRRPSVTPVDADCQKQMMQRLGDAGFALEPMRIEDVDNFWATH
GKHDGPVLCFAGHTDVVPTGPVTAWQIDPFNAVIDEHGMLCGRGAADMKGSLASMTVAAE
RFVTDYPDHKGKVAFLITSDEEGPAHHGTKAVIERLAARKERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGAKLTVRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDFFPPTSFQ
ISNVNSGTGATNVIPGDLVAVFNFRFSTESTVEGLQKRVADILDKHGLDWHIDWALSGLP
FLTEPGALLDAVASSIKDITGRETKASTSGGTSDGRFIATMGTQVVELGPVNATIHQVNE
RVLAADLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccacgccgacctttcgccgacccttcaactcgccatcgacctgatccgccgt
ccgtccgtgacgccggtcgacgccgattgccagaagcagatgatgcagcgcctgggcgat
gccggttttgcgctcgagccaatgcgcatcgaagatgtggataacttctgggcgacccac
ggtaaacacgacggcccggtgctgtgcttcgccggccacaccgacgtggtgccgaccggc
ccagtgaccgcctggcagatcgacccgttcaacgcggtgatcgatgaacacggcatgctc
tgcggccgtggcgcggcggacatgaaaggcagcctcgcgtccatgaccgtggcggccgag
cgtttcgtcaccgactacccggatcacaagggcaaggtcgctttcctgatcaccagcgac
gaagaaggcccggcgcaccacggcaccaaagcggtgatcgaacgccttgccgcccgcaag
gagcgtctggactggtgcatcgtcggcgaaccgtcgagcaccaccctggtgggcgatgtg
gtcaagaacggccgtcgcggctcccttggcgccaaattgaccgtgcgcggcgtgcagggt
cacgtggcgtatccgcatctggcgaagaacccgatccacctcgcggccccggcgttggcc
gaactggccgccgagcactgggaccacggcaacgatttcttcccgccgaccagcttccag
atctccaacgtgaattccggcactggcgcgaccaacgtgatcccgggcgacctggtggcg
gtgttcaacttccgcttctccaccgaatccacggttgaaggcctgcaaaaacgcgtcgcc
gacatcctcgacaagcatggcctggactggcacatcgactgggcgctgtccggcctgccg
ttcctcaccgaaccgggggcattgctggatgccgtggcgtcgagcatcaaggacatcacc
gggcgcgaaaccaaagcttccaccagtggcggcacctccgacgggcgcttcatcgcgacc
atgggtacgcaggtggttgaactgggcccggtcaacgcgacgatccatcaggtcaacgag
cgcgtgctggctgccgacctcgatgtgctgaccgaaatctactaccagaccctgatcaag
ttgctcgcctga
DBGET
integrated database retrieval system
