Pseudomonas frederiksbergensis: PFAS1_18025
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Entry
PFAS1_18025 CDS
T04786
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00362
Benzoate degradation
pfk00624
Polycyclic aromatic hydrocarbon degradation
pfk01100
Metabolic pathways
pfk01120
Microbial metabolism in diverse environments
pfk01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PFAS1_18025
00624 Polycyclic aromatic hydrocarbon degradation
PFAS1_18025
Enzymes [BR:
pfk01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
PFAS1_18025
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
NOMO1-like_2nd
TTR_TEN1-4
SdrD_B
DUF4198
Motif
Other DBs
NCBI-ProteinID:
APV41161
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Position
3883933..3884637
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AA seq
234 aa
AA seq
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MTDKPGYRRPQEGTQPEYLHPAYQSTNRRSPSKPLVFLPHSLSEITGPTIGAERIQAQDN
DLTAQHKGAPLGERIIIHGRVLDEDGLPVPGILVEIWQANAAGRYNHDRDLHDAPLDPNF
TGTGRTVTDADGWYQFQTIKPGAYPWGNHHNAWRPAHIHFSLFGPSILTRLVTQMYFPGD
PLLAYDPIYNCVPDTSAKERLIASFDLEKTIPSYALGYRWDIVLRGREATPMEK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaagcctggttaccgccgcccgcaagagggcacccagccggaatacctgcac
ccggcctatcaatccaccaaccgtcgctcgccgtccaagccgttggtgtttttgccccat
tcgctgtcggaaattaccggtccgaccatcggtgccgagcgcattcaagcgcaggacaac
gacctgaccgcccagcacaagggcgcgccattgggcgagcgcatcatcattcatggccgc
gtgctggatgaagatggtttgccggtgccggggattctggtggaaatctggcaggccaac
gccgccggtcgctacaaccatgatcgcgacctgcacgatgcaccgctggacccgaatttc
accggcactggccgcactgtgaccgacgccgatggctggtaccaattccagaccatcaag
cccggcgcctatccgtggggcaaccaccacaacgcatggcgcccggcacacatccatttc
tcactgttcgggccgagcattctgacgcggctggtcacgcagatgtatttcccgggcgac
ccgctgctggcgtatgacccgatctacaactgcgtaccggataccagcgccaaagagcgt
ttgatcgccagtttcgacctggaaaaaaccatcccttcctatgccctcggttatcgctgg
gacatcgtcttgcgcggccgcgaagccacgccgatggagaaataa
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