Pseudomonas frederiksbergensis: PFAS1_18215
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Entry
PFAS1_18215 CDS
T04786
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00280
Valine, leucine and isoleucine degradation
pfk00650
Butanoate metabolism
pfk00907
Pinene, camphor and geraniol degradation
pfk01100
Metabolic pathways
pfk01120
Microbial metabolism in diverse environments
pfk04146
Peroxisome
Module
pfk_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PFAS1_18215
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PFAS1_18215
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PFAS1_18215
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFAS1_18215
Enzymes [BR:
pfk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
PFAS1_18215
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Motif
Pfam:
HMGL-like
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
APV41196
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All DBs
Position
3922317..3923243
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AA seq
308 aa
AA seq
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MITDFSETLIVQEVSPRDGLQIEPTWVETVDKIALIDQLSLAGFSRIEAGSFVSPKAIPA
LRDGELVFKGIARQPGVIYVALIPNLKGAQRALATGADELNLVMSASQTHNLANMRMRCE
TSLTAFGEIVQYVRGTTVRLNASIATAFGCPFEGKIDEARVLQIVEAYQELGIQGITLAD
TTGMANPRQVDRLVRRVLQRVSPADLTLHFHNTRGLGLCNVLAAYEAGARRFDAALGGLG
GCPFAPGASGNICTEDLVNLCAEIGIHTGIDLPLLLQLARGLPALLGHEVPGQLAKAGRN
CDLHPSPS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgatcactgatttttccgagaccctgattgttcaggaagtctccccccgcgacggcttg
cagatcgagccgacctgggtcgaaaccgtcgacaagattgccttgatcgatcagctgtcg
ctggccggtttcagccgcatcgaagcaggttcgttcgtttcgcccaaggcgattccggcg
ctgcgcgatggtgagctggtattcaagggcatcgcccggcaacccggggtgatttacgtc
gcgttgatccccaacctgaaaggtgcacaacgagcactggcgactggggctgacgagttg
aacctggtgatgtccgccagccagacccacaacctggccaacatgcgcatgcgttgcgaa
acctcactgaccgcctttggcgagatcgtgcaatacgttcgcgggacgacggtgcgactc
aacgccagcatcgccaccgccttcggctgcccgttcgaaggcaagatcgacgaggctcgc
gtgctgcaaatcgttgaggcttatcaggaactcgggatccagggcattaccctggccgac
accactggcatggccaatccgcggcaggtcgatcggctggtgcggcgggtcttgcagcga
gtttcgccggctgatctgaccctgcatttccacaacacgcgcgggctcggtctgtgcaac
gtgctggccgcctacgaggccggtgcccgacgctttgacgcggcgctgggcggcctcggc
ggttgcccgttcgcgccgggtgcctcgggcaatatttgcaccgaggatttggtcaacctg
tgcgctgaaatcggcattcacaccggcatcgatctgccgctgttgctgcaattggcgcga
ggactgcccgcgctgctgggccacgaagtgcccggtcaactggccaaggccggacgcaat
tgtgatctgcatccaagcccgtcctaa
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