Pseudomonas frederiksbergensis: PFAS1_18290
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Entry
PFAS1_18290 CDS
T04786
Name
(GenBank) inclusion body protein
KO
K20275
nematocidal protein AidA
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFAS1_18290
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PixA
Motif
Other DBs
NCBI-ProteinID:
APV41210
LinkDB
All DBs
Position
complement(3933251..3933754)
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AA seq
167 aa
AA seq
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MSRVTDVLVSIDTETILKNYPNISKNPAAPTLIDVNHVYMVTNQNNVVSGQAGGELNLKA
QVGDLIRWRETSLSQSFETAVIFYKFIGNVGNDLISTPTPRKATACVAVPNTSNPSVPSC
QKVDNHYWSSETLSCGSVTYHFHFLIVDRDCKIVGCCSWDPFITIRN
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgagtcacggatgtacttgtttcaatcgacactgaaaccattctgaaaaactac
ccgaacatcagcaaaaaccctgccgcgccgacgttaatcgacgtcaatcatgtgtacatg
gtgaccaatcagaacaacgtcgtcagcggccaggccggtggcgaactcaacctgaaagcc
caggtcggcgacttgattcgctggcgtgaaaccagcctgtcgcagagcttcgagacggca
gtgattttctacaagttcattggcaacgtcggcaacgatctgatttccacacccacgccc
cgcaaggctacagcgtgcgttgccgtccccaacaccagcaacccgtcggtgcctagctgc
cagaaagtcgacaaccattactggtcttcggaaacactttcatgcggtagcgtgacctac
cacttccattttctgatcgttgatcgcgactgcaagatcgtaggctgctgctcgtgggat
ccgttcattaccatccgaaactga
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