Pseudomonas frederiksbergensis: PFAS1_18830
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Entry
PFAS1_18830 CDS
T04786
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K16053
miniconductance mechanosensitive channel
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_18830
Transporters [BR:
pfk02000
]
Other transporters
Pores ion channels [TC:
1
]
PFAS1_18830
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
APV41310
LinkDB
All DBs
Position
complement(4038835..4040133)
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AA seq
432 aa
AA seq
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MDIKQLWLNVQDLWGALDQHPLLHSSLALVVLLVVALALGRVARFLILHATKILGRQPAL
HWINDFRHNKVFHRLAQITPSLVIQFGLHLVPELGKTSLIFLGNVALAFTILFLVLAISA
LLSALLDIYARTEHARTRSIKGYVQLAKMVLYVFGAIIIVATLIDRSPLLLLSGLGAMSA
VILLVYKDTLLSFVASVQLTSNDMLRVGDWIEMPQVGADGDVVDITLHTVKVQNFDKTIV
SIPTWRLMSESFKNWRGMQQSGGRRIKRSLFIDASGVRFVRDDEEAKLAQVHLLTDYISR
KQAELKAWNEAQGNVAAMSANRRRMTNIGTFRAYALAYLKSHPEIQPNMTCMVRQMQTTA
QGIPLEIYCFTRTTVWADYERIQGDIFDYLLAVLPEFGLSLYQQPSGGDLRAGLLPAMLG
ASHIPEPEKHIM
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaacagctctggctcaacgtccaagacctttggggtgcccttgatcagcac
ccgctcctgcattccagcctggctttggtggtattgctggtggttgcgctggccctcgga
cgagtggcgcgcttcctcattctgcatgcgaccaaaattctcggtcgccagccagcgctg
cactggatcaatgactttcggcataacaaggtctttcatcgcctggcgcagatcaccccc
tcgctggtgatccagttcggcttgcacctggtgccggagctgggcaagaccagcctgatc
ttccttggcaatgtagcgctggcgttcaccattctattcctggtgctggccatcagtgcg
ctgctcagcgccctgctcgacatctacgcgcgcaccgaacatgcccgcacccgctcgatc
aaaggctacgtgcaactggcgaaaatggtcttgtacgtgtttggcgcgatcatcatcgtc
gccacgctgatcgaccgttcgccgctattgctgctgtcagggctgggcgccatgtcggcg
gtaatcctgttggtctacaaagacactctgctgtcgttcgtcgccagcgtgcagctgacc
agcaacgacatgctgcgggtcggcgactggatcgagatgccgcaagtcggtgccgacggt
gacgtggtggatatcacgctgcacacagtcaaagtgcagaatttcgacaagacgattgtg
tcgattccaacctggcgcctgatgtccgagtcgttcaagaactggcgcggcatgcagcaa
tccggtggacgacggatcaagcgcagcctgttcatcgacgccagcggcgtgcggtttgtg
cgcgacgacgaagaggcaaaactggctcaggtgcatctgctgaccgactacatcagtcgc
aagcaggctgaactcaaggcctggaacgaggcccagggtaatgtggcggcgatgtcggcc
aaccgtcggcggatgaccaatatcgggacgttccgcgcctatgcgctggcgtatctgaag
agtcacccggagattcagccgaacatgacctgcatggtccgccagatgcaaaccaccgcc
cagggcattccgctggaaatctactgcttcacccgcaccaccgtgtgggcggattacgag
cggattcagggggatattttcgattacttgctggcggtgttgccggagtttggcttgagc
ctttatcagcagcccagtggcggggatttgcgggcggggttgttgccggcgatgttgggc
gcgagccatattcctgaacccgaaaaacacatcatgtga
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