KEGG   Pseudomonas frederiksbergensis: PFAS1_18935
Entry
PFAS1_18935       CDS       T04786                                 
Name
(GenBank) channel protein TolC
  KO
K12543  outer membrane protein, adhesin transport system
Organism
pfk  Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pfk02000]
    PFAS1_18935
   02044 Secretion system [BR:pfk02044]
    PFAS1_18935
Transporters [BR:pfk02000]
 Other transporters
  Pores ion channels [TC:1]
   PFAS1_18935
Secretion system [BR:pfk02044]
 Type I secretion system
  Adhesin protein transporter
   PFAS1_18935
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: APV41330
UniProt: A0A1P8EYM8
LinkDB
Position
complement(4061569..4062927)
AA seq 452 aa
MRVLTPLCSAILLAMACASQAQAMSLTEAIQSTIATHPELASRVDSRLSADEQVKVAKGG
FYPSVDLNAAYGRGYSDNTSTRALGNHHTEILTYTQSELRLRQMLFDGFNTANEVQRTKG
VVNSRAYYAQGTAQDLALRTIEVYLEVLKRRELVTLAKNNLQAHMRVNDQIGLRTERGIG
STADSDQSVARRALAQNNLDTAEVDLADAESNFYAVVGRLPDELETPPSTRGELPATLQE
AQQSMVENNPYLKSAQADVQSAESQYEVAKSPFYPRFDAEAAVGANNNVQGDEGHDNEWR
VGIVMNYNLFRGGSDKARLASDAHQINQAMDIRNNALRQLNENIHLAWNAMVNAKKQTPT
AREYADTSQRVRVAYQDQFGLGQRTLLDLLDSENELYNANRRYTEVRYTEEFSMYRVLAN
MGQLLSKQRVVLPADAIASTEVKNEARLPELK
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgcgcgtattaacccccctctgcagcgcaattctgctggccatggcctgcgcttctcaa
gctcaggccatgtcattgacggaggcgatccagagcaccatcgcgacccacccggagctg
gcctcgcgcgtagacagccgcctttcggccgatgaacaagtgaaagtcgccaagggagga
ttttatccatcggttgatctgaatgccgcgtacgggcgcgggtacagcgataacaccagc
acccgggcactcggtaatcaccacaccgaaatcctcacctacacccaatcggaattgcgt
ctgcggcagatgctcttcgatggcttcaataccgccaacgaagtccagcgcaccaaaggc
gtggtcaattcccgggcctattacgctcagggcaccgctcaggatctggccctgcgtacc
atcgaggtctacctcgaagtgctcaagcgccgcgagctggtgaccttggccaagaacaat
ctgcaagctcacatgcgggtcaacgatcagatcggcctgcgcaccgagcgtggtatcggc
agcaccgccgactccgaccagtccgtcgctcgccgggcactggcacaaaacaacctcgat
accgctgaagtcgatctggcggatgccgaatcgaacttctacgccgtcgtggggcgcctg
cccgatgagctagaaaccccgccctcgacccgcggcgaactgcccgccaccttgcaggaa
gcccagcaaagcatggtggaaaacaacccgtacctgaaatccgcccaggccgatgtgcag
tcagccgagagccagtacgaagtcgccaagtcgccgttctaccctcggttcgacgccgaa
gccgccgtgggtgccaacaacaacgtgcagggcgatgaaggccatgacaacgaatggcga
gtcggcatcgtgatgaactacaacctgttccgcggtggcagcgacaaggctcgcctggct
tccgatgcgcaccagatcaaccaggcgatggacatccgcaacaatgccctgcgccaactc
aacgagaacattcacctggcctggaacgccatggtcaacgccaagaaacaaaccccgact
gcccgcgaatatgccgataccagccaacgcgtgcgcgtggcgtatcaggaccagttcggc
ctaggccaacgcaccctgctcgacctgctggacagtgaaaacgagctctacaacgccaac
cgccgctataccgaagtgcgctacaccgaggagttctcgatgtaccgcgtgctggcgaac
atgggtcagttgctgagtaaacaacgggtggtattgcccgccgatgcgatcgcctccacg
gaagtaaaaaacgaagcccgtctgcctgaactgaagtag

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