Pseudomonas frederiksbergensis: PFAS1_19080
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Entry
PFAS1_19080 CDS
T04786
Name
(GenBank) 23S rRNA pseudouridylate synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfk03009
]
PFAS1_19080
Enzymes [BR:
pfk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PFAS1_19080
Ribosome biogenesis [BR:
pfk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PFAS1_19080
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
APV41358
UniProt:
A0A1H4XC26
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All DBs
Position
4093883..4095181
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AA seq
432 aa
AA seq
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MSIKDQKDDQEIGPAGEKLQKVLARIGVGSRRDVEAWISHGRIKVNGKDATLGQRVDMHD
AITIDGKVIKREEAAESVRRVIMYNKPDGEICTRLDPEGRPTVFDKMPKPKEGRWINIGR
LDINTTGLLMFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVVLEDGPAK
FTDIKQAPGGEGFNHWYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLNSDLPMG
RWREMSQYEVDILSAEVGLTPVAMPQMNAKSKDKLDRMQRKSSRPMGKTERVRSLRPAIG
NQTAATPRDTREPHIEGERPARKPAAPRADGERGPRTPRPANGRTERGEGRGAPSGGRSD
RGAPAGRGESRGESGRGTPVADRPSDTKRPAKAPAKKRPGIVLVDKDAPSGKRRGAPAGS
GQRPGFGRRKPE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcaaagaccagaaagacgaccaggaaatcggcccagcaggcgaaaaactgcag
aaagtcctcgcccgtatcggcgtcggctcgcgccgtgacgtggaagcctggatcagccac
ggccgcatcaaggtcaatggcaaagacgccaccctcgggcagcgcgtcgacatgcacgac
gccatcaccattgatggcaaggtgatcaagcgcgaagaagccgccgagtcggtacgccgc
gtgatcatgtacaacaagccggacggcgaaatctgcacccgccttgatccggaaggtcgt
ccgaccgttttcgacaagatgccgaaaccaaaagaaggtcgctggatcaacatcggtcgt
ctggacatcaacactaccggcctgctgatgttcaccaccgacggtgagctggccaaccgc
ctgatgcacccttcctacgaaatggaccgtgaatacgcggtgcgtgtccgtggtgaagtc
gatgacgagatgattgagcgtctgaaagcaggcgtcgtcctcgaagacggcccggccaag
ttcaccgacatcaagcaggcgccaggtggcgaaggtttcaaccactggtaccactgcgtg
gtgatggaaggtcgcaaccgcgaagtccgtcgtctgtgggaatcccagggcctggtggtc
agccgtctgaagcgtgtgcgtttcggtccggtgttcctcaactccgacctgccgatgggc
cgctggcgcgaaatgagccagtacgaagtcgatattctgagtgctgaagtcggcttgacc
ccggtggccatgccgcagatgaacgccaagagcaaagacaagctcgatcgcatgcagcgt
aaatcgtcgcgtccgatgggcaagaccgagcgcgtgcgttcgttgcgtccagccatcggt
aaccagactgctgctacgccgcgtgatactcgcgaaccgcatatcgaaggcgagcgccca
gcccgcaagccagctgcacctcgtgctgacggcgagcgcggtccacgcacgccacgtccg
gccaatggtcgcaccgagcgcggcgaaggccgcggtgcgccaagcggtggtcgtagcgat
cgcggtgctccggccggtcgtggcgagtctcgtggtgagtcgggtcgcggtacgcctgtg
gcagaccgtccttccgacaccaagcgcccggccaaggctccggcgaagaagcgtccaggc
atcgttctggtcgacaaggacgcgccatcgggcaagcgccgtggcgcgccagccggttcg
ggccagcgtccgggcttcggtcgtcgcaagcctgagtaa
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