Pseudomonas frederiksbergensis: PFAS1_19595
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Entry
PFAS1_19595 CDS
T04786
Name
(GenBank) succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00020
Citrate cycle (TCA cycle)
pfk00640
Propanoate metabolism
pfk00660
C5-Branched dibasic acid metabolism
pfk00720
Other carbon fixation pathways
pfk01100
Metabolic pathways
pfk01110
Biosynthesis of secondary metabolites
pfk01120
Microbial metabolism in diverse environments
pfk01200
Carbon metabolism
Module
pfk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pfk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PFAS1_19595
00640 Propanoate metabolism
PFAS1_19595
00660 C5-Branched dibasic acid metabolism
PFAS1_19595
09102 Energy metabolism
00720 Other carbon fixation pathways
PFAS1_19595
Enzymes [BR:
pfk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
PFAS1_19595
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GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
ATP-grasp
OKR_DC_1_N
Ligase_CoA_2
Motif
Other DBs
NCBI-ProteinID:
APV41454
UniProt:
A0A1J0EGU7
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All DBs
Position
4200553..4201719
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AA seq
388 aa
AA seq
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MNLHEYQGKQLFAEYGLPVSQGFAVDTPEAAAEACDKIGGTEWVVKAQVHAGGRGKAGGV
KLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYLGAVVDRSSRR
IVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRELAFQLGLEGKQVAQFAKI
FVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLKTFHDPSQDDP
REAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTE
AFKIILSDTNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLEGNNAELGAKV
LAESGLNIIAATSLTDAAQQVVKAAEGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcacgagtatcagggtaagcagctgttcgctgaatacggcctgccagtatcc
cagggtttcgccgtagacaccccggaagcagcagcagaagcgtgcgacaagatcggcggg
accgaatgggttgtcaaagcccaggttcacgcaggtggtcgcggtaaagcgggcggcgtt
aagctggttcgcagcaaagaagacgccaaagcattcgctcaacagtggttgggcaagcgt
ctggtgacttaccagactgatgccaatggtcagccagtcaccaagatcctggttgaatcg
tgcactgatatcgctaaagagctgtacctgggcgctgtcgttgaccgttcgagccgtcgc
atcgtgttcatggcttccaccgaaggtggcgtggacatcgagaaaatcgctcacgacacc
cctgagaaaatcctcaaggccactatcgatccactggttggcgctcagccattccagggt
cgcgagctggcattccagctgggtctggaaggcaagcaagttgctcagttcgccaagatc
ttcgtaggtctggccaagctgttcaaggatcacgacctggctctgctggaagtgaacccg
ctggtgatcaaggctgacggcgatctgcattgcctcgacgccaagatcaacatcgacgcc
aacgccatgtaccgtcagcctaagctgaagactttccacgatccgtcgcaagacgatccg
cgcgaagcgcacgctgccaagttcgaactgaactacgtagcactggaaggcaacatcggt
tgcatggtcaacggtgctggcctggccatgggtaccatggacatcgtcaacctgcatggc
ggcaaaccagccaacttcctcgacgtgggcggcggtgctaccaaagaacgcgttaccgaa
gcgttcaagatcatcctgtccgacactaacgtcgctgcagtattggtcaacatcttcggc
ggcatcgttcgttgcgacatgattgccgaaggcatcatcggcgctgtgaaagaagtcggc
gtgaaaatcccggttgttgttcgccttgaaggcaacaacgctgagctgggcgctaaagta
ctggcagaaagcggtttgaacatcatcgctgctaccagcctgaccgacgctgctcaacaa
gttgtcaaagctgcggagggcaaataa
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