Pseudomonas frederiksbergensis: PFAS1_19815
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Entry
PFAS1_19815 CDS
T04786
Name
(GenBank) hybrid sensor histidine kinase/response regulator
Organism
pfk
Pseudomonas frederiksbergensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_7
HATPase_c
HisKA
Response_reg
SSF
PAS_8
HATPase_c_2
PAS
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
APV41493
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Position
complement(4242965..4246435)
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AA seq
1156 aa
AA seq
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MSLSSGLIAVVALAYMAIMFAIAFYGDRRSTPLPPRVRAWVYSLSLAVYCTSWTFFGAVG
QAAEQLWSFLPIYLGPILLLVCAPWVLQKMVMISKQENITSIADFIAARYGKSQSLAVVV
ALICLVGVLPYIALQLKGIVLGVNLLIGAGADAMGTRAQDTALIVSLVLALFTIVFGTRN
LDATEHHRGMVLAIAFESLVKLFAFLAVGAFVTYGLYDGFEDLFDQAMLAPRLEEYWKET
INWPSMVVQTGVAMMAIICLPRQFHVTVVENIDPQDLRLAKWVFPAYLALAALFVVPIAL
AGQMMLPSSVLPDSFVISLPLAQAHPALAMLAFIGGASAATGMVIVASVALSTMVSNDML
LPWLLRRNNAERPFEVFRQWMLSVRRVSIVVILLLAYVSYRLLGSTASLATIGQIAFAAV
TQLAPAMLGALYWKQANRRGVFAGLAAGTFLWFYTLVLPIAANSLGLSLNSFPGLAWLHS
NPLNLPITPLTQGVVLSLAGNFTLFAWVSVLSRTRVSEHWQAGRFIGQEISARPNARSML
SVQIDDLLQLAARFVGEERARQSFIRFAYRQGKGFNPNQNADGEWIAHTERLLAGVLGAS
STRAVVKAAIEGREMQLEDVVRIADEASEVLQFNRALLQGAIENITQGISVVDQSLKLVA
WNRRYLELFNYPDGLIRLGRPIADIIRYNAERGLCGPGEAEVHVARRLHWMRQGRAHTSE
RLFPNGRVIELIGNPMPGGGFVMSFTDITAFREAEQALTEANEGLERRVTERTHELSQLN
LALTEAKGTAELANQSKTRFLAAVSHDLMQPLNAARLFSAALSHQEDGLSGEAQKLVHHL
DTSLRSAEDLISDLLDISRLENGKINPDPKPFVLNEMFDVLGAEFKALAHDQGLKFRVRG
STLRVESDIKLLRRILQNFLTNAFRYAKGPVLLGVRRRKGELCLEVWDRGPGIPLDKQQV
IFEEFKRLDSHQTRAEKGLGLGLAIADGLCRVLGHTLRVRSWPGRGSVFSVSVPLARAQT
AIPPKVAELNGKLLSGSQVLCIDNEDSILIGMNSLLTRWGCQVWTARNRDECAALLSDGM
RPQLALVDYHLDDGETGTELMAWLRTRLGEPVPGVVISADGRPETVAQVHAAGLDYLAKP
VKPAALRALLSRHLPL
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtccagcgggctgatcgccgtcgtcgccctggcctatatggccatcatgttc
gccatcgccttctacggcgaccgtcgcagcacaccgttgccgccgcgagtgcgcgcctgg
gtgtacagcctgtcgctggccgtctattgcaccagctggaccttctttggcgccgtgggc
caggccgccgaacaactctggtctttcctgccgatctacctcgggccgatcctgctgctg
gtgtgcgcaccgtgggtcctgcaaaaaatggtgatgatcagcaaacaggagaacatcacc
tccattgccgacttcatcgccgcgcgttatggcaaatcccagtcgctggcggtggtggtg
gcgctgatctgcctggtcggcgtgttgccctacatcgcgctgcaactcaagggcattgtg
ctcggggtgaacctgctgatcggcgccggtgccgacgccatgggcacgcgcgcccaggac
acggcgttgatcgtgtcgctggtactggcgctgttcaccatcgtcttcggtacccgcaac
ctcgacgctacggaacaccaccgcggcatggtgctggcgattgcgttcgaatcgctggtc
aagctgttcgcctttctcgcggtcggcgcgttcgtgacctacggcctgtacgacggtttc
gaggacctgttcgaccaggccatgctcgccccgcgccttgaagagtattggaaggaaacc
atcaactggccatcgatggtggtacagaccggcgtggcgatgatggcaatcatctgcctg
ccccggcagttccatgtgaccgtggtggaaaacatcgaccctcaggatctgcgcctggcc
aaatgggtgtttccagcctatctggcgttggcggcgttgttcgtcgttcccatcgccctc
gccggccagatgatgttgccgagttcagtgctgccggactcgttcgtcatcagcctgccg
ctggctcaagcccatcctgccctggcgatgctggcttttatcggcggcgcctcggcggcg
accggcatggtgattgtcgccagcgtcgcgctgtcgaccatggtttccaacgacatgctg
ttgccatggctgctgcggcgcaacaacgccgagcggccgttcgaagttttccgccagtgg
atgctctcggtgcgccgagtgagcattgtggtgattctgctgctggcctatgtcagttat
cgcctgctcggctcgacggcgagcctggcgaccatcggccagatcgccttcgccgccgtg
acccagctggcccccgccatgctcggcgccctgtactggaaacaggccaatcgtcgcggg
gtgttcgccggtctcgccgccgggacgttcctgtggttctacaccttggtcctgccgatt
gccgccaacagcctcggtttgtcgttgaacagcttcccggggctggcctggctgcacagc
aacccgttgaacctgccgattaccccgctgacccaaggcgtggtgctgtcgcttgcgggc
aacttcacgctgttcgcctgggtgtcggtgctatcgcgtacgagggtttcggaacattgg
caggcgggtcgcttcattggtcaggaaatcagcgcccgtcccaacgcccgttcgatgctg
tcggtgcagatcgatgatttgttgcagctggccgcacgcttcgtcggcgaagaacgcgcc
cgtcagagctttatccgcttcgcctaccgtcagggcaaaggcttcaacccgaaccagaat
gccgacggggaatggatcgcccacactgaacgcttgctggccggtgtactcggcgcttcc
tcgacccgagcggtggtaaaagccgccatcgaaggccgggaaatgcaactcgaggacgtc
gtgcgaatcgccgacgaagcttcggaagtgctgcaattcaaccgcgcgctgctgcaaggc
gcgatcgagaacatcacccaaggcatcagcgtggtcgaccagtcgctgaaactggtggcc
tggaaccggcgctatctggagctgttcaactaccccgatggactgatcaggctgggccgc
ccaattgccgacatcattcgctacaacgccgagcgcggactatgcggtcccggtgaagcc
gaagtgcacgttgcccggcgcctgcactggatgcgtcagggccgcgcccacacctctgaa
agacttttccccaatggtcgtgtgatcgagctgatcggcaacccgatgccgggcggtggt
tttgtcatgagtttcaccgacatcaccgcgttccgcgaggctgaacaagcgctgaccgaa
gccaacgagggcctggagcgacgggtcaccgagcggacccacgaactgtcgcaactcaac
ctcgccctgaccgaagcgaaaggcaccgcggagctggccaaccagtcgaaaacccgattc
ctggcggcggtcagccacgacttgatgcaaccgttgaacgctgcgcgactgttctcggcc
gccctgtcccaccaggaggacggtctctccggcgaggcgcaaaaactggtccatcatctg
gacacgtcactacgctcggcggaggatttgatcagcgacctgctggacatttcccgcctg
gaaaacggcaagatcaaccccgatcccaagccgttcgtgctcaatgagatgttcgacgta
ctcggtgccgagttcaaggcgctggcccacgaccaagggctgaaattccgggtcaggggc
agtacgttgcgcgtcgaaagcgacatcaaactgttgcgacgaatcctgcagaacttcctg
accaatgccttccgctatgccaaaggcccagtgctgctgggggttcgccgacgcaagggc
gagctgtgcctggaagtctgggaccgtggcccgggcattccgctggataaacagcaggtc
attttcgaagaattcaaacgcctcgacagccaccagacgcgcgctgaaaaaggcctcggg
ctgggcctggcgatcgccgacgggttgtgccgcgtgctcggtcataccttgcgcgtacgc
tcctggccggggcgcggcagcgtgttcagcgtcagcgtgccgttggctcgggcgcaaacc
gcgatcccacccaaggtcgccgagctcaatggcaaattgctgagcggctcgcaagtgctg
tgcatcgacaacgaagacagcatcctgatcgggatgaacagtttgctgacgcgctggggt
tgtcaggtctggaccgcgcgcaaccgcgatgaatgtgcggcgctgctcagcgacgggatg
cgaccgcaattggccttggtggattaccacctggacgatggcgagaccggaaccgaactg
atggcatggctgcgcacccgattgggtgagcctgtgccgggggttgtgatcagcgccgat
gggcgaccggagacggtggcccaggtgcatgcggcggggctggattacctggctaaaccg
gtgaaaccggcggcgttgcgggcattgttgagtcggcatttgccgttgtag
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