Pseudomonas frederiksbergensis: PFAS1_19905
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Entry
PFAS1_19905 CDS
T04786
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PFAS1_19905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pfk03011
]
PFAS1_19905
Ribosome [BR:
pfk03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PFAS1_19905
Bacteria
PFAS1_19905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
APV41511
LinkDB
All DBs
Position
4268063..4269754
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AA seq
563 aa
AA seq
DB search
MSESFAELFEESLKTLNLQAGSIITGVIVDIDYQARWVTVHAGLKSEALIPLEQFYNDAG
ELTINVGDEVHVALDSVEDGFGETKLSREKAKRAECWIVLEAAFAAEEVVKGVINGKVKG
GFTVDVNGIRAFLPGSLVDVRPVRDTTHLEGKELEFKVIKLDQKRNNVVVSRRSVLEAEN
SAEREALLESLQEGQQVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRIKHPSEIVNVG
DEIDVKVLKYDRERNRVSLGLKQLGEDPWVAIKARYPESTRVTARVTNLTDYGCFAELEE
GVEGLVHVSEMDWTNKNIHPSKVVQVGDEVEVMVLDIDEERRRISLGIKQCKSNPWEDFS
GQFNKGDKISGTIKSITDFGIFIGLDGGIDGLVHLSDISWNEVGEEAVRRFKKGDELDTV
ILSVDPERERISLGIKQLESDPFSEYVQENDKGAIVKGIVKEVDAKGAIITLADDIEATL
KASEISRDRVEDARNVLKEGQEVEAKIISVDRKSRVIQLSIKSKDDAEEKEAIQSLKDKP
SDSIAAGPTTLGDLLRAQMEKQN
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagctttgcggaactctttgaagaaagcctaaaaaccctgaaccttcaggca
ggctccatcatcaccggtgttatcgttgatatcgattaccaggctcgctgggtaaccgtt
cacgctggcctgaagtctgaagcactcatcccgcttgagcagttctacaacgatgctggc
gaactgactatcaacgtcggtgacgaagttcacgttgctctggactcggttgaagacggc
tttggtgaaaccaagctgtcccgtgaaaaagccaagcgcgctgaatgctggattgttctg
gaagcagccttcgcagccgaagaagtggtcaagggcgttatcaacggtaaggttaaaggc
ggcttcactgtcgacgttaacggcatccgtgcgttcctgccaggttctctggttgacgtc
cgtcctgtgcgcgacaccacgcacctggaaggcaaagagctggaattcaaggtcatcaag
cttgaccagaaacgcaacaacgttgtcgtttcccgtcgtagcgtcctcgaagccgagaac
tccgctgagcgtgaagctctgctggaatccctgcaggaaggccaacaagtcaaaggtatc
gttaaaaacctcaccgattacggtgcattcgtcgatctgggtggcgtcgatggcctgctg
cacattaccgacatggcttggaagcgtatcaagcatccttccgaaatcgtcaacgttggc
gacgagatcgatgtcaaggttctgaagtacgatcgcgaacgcaatcgtgtttccctgggc
ctcaagcaactgggcgaagatccatgggttgctatcaaagcccgttacccagaaagcact
cgcgttaccgctcgtgtaaccaacctgaccgactacggctgcttcgctgagctggaagaa
ggcgttgaaggcctggtacacgtttccgaaatggactggaccaacaagaacatccaccct
tcgaaagtcgtacaagtcggcgacgaagtggaagttatggttctggacatcgacgaagag
cgtcgtcgtatctccctcggcatcaaacagtgcaaatctaacccatgggaagatttctct
ggccagttcaacaagggcgataaaatctccggcaccatcaagtcgatcaccgatttcggt
atcttcattggtctggacggcggcatcgacggtctggttcacctgtccgacatctcctgg
aacgaagtgggcgaagaagccgttcgccgcttcaagaagggcgacgagctggacaccgtt
atcctgtcggttgacccagagcgcgagcgcatctccctgggtatcaagcagctggaaagc
gatccgttctccgagtacgttcaagagaacgacaaaggcgcaatcgttaaaggcatcgtg
aaagaagttgacgctaaaggcgccatcatcactctggccgacgatatcgaagcgactctg
aaagcctccgaaatcagccgtgaccgcgttgaagacgcgcgtaacgttctgaaagaaggc
caggaagtagaagccaagatcatcagcgttgaccgcaagagccgtgtaatccagctctcc
atcaagtcgaaagacgatgctgaagagaaagaagcaatccagagcttgaaagacaagcct
tcggatagcatcgctgctggtcctaccactctgggcgacctgttgcgtgcacaaatggaa
aaacagaactaa
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