Pseudomonas frederiksbergensis: PFAS1_20295
Help
Entry
PFAS1_20295 CDS
T04786
Name
(GenBank) hypothetical protein
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk01501
beta-Lactam resistance
pfk02020
Two-component system
Module
pfk_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFAS1_20295
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PFAS1_20295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_20295
01504 Antimicrobial resistance genes [BR:
pfk01504
]
PFAS1_20295
Transporters [BR:
pfk02000
]
Other transporters
Pores ion channels [TC:
1
]
PFAS1_20295
Antimicrobial resistance genes [BR:
pfk01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PFAS1_20295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
APV43206
LinkDB
All DBs
Position
complement(4359889..4361142)
Genome browser
AA seq
417 aa
AA seq
DB search
MAADSTEPETSDFLKDATLNVLSRNFFLNNDNHSQNAAKNYQREWAQGFITTFESGFTPG
TFGFGVDVHAFVGQKLDGGKGHSGTGLLPVDSDGESARNFSDGGGVIKARLSQTVIKFGE
MEVESPVFDTSDKRLQPEYATGWLLQSDELAGIHLVGGKFTAFKNQDSSSSKGDFAGYGV
NTDVGSISFVGADFTSNKNLGARLYASQLTDTWRQYYANVYARRGDTFVDFNIYRTVDYG
RSAAGAISTTAYSLSAKHNIGSQAFTLAAQKIHGDTPFDFVGGDSIYLANSIKFADFNGA
HESSYQARYDLDFASMGFPGLKFMSRYVTGRDIDGTHAPQGGAYFPFDTSEQDFVPQQGK
GGKHWERDIDLSYTVQFGPAKDLLLHFTHVSHRANEAQGGPDIDRIYFVVEYNFKLL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagactcgacagagcccgaaacgtcagactttctaaaggacgcaacgctcaac
gttctcagtcgaaatttcttcttaaacaatgataaccactcccagaacgctgcgaaaaat
taccagcgggaatgggcgcaaggcttcatcacgacgtttgagtcaggcttcacgcccgga
acatttggttttggtgtggatgtgcatgcttttgtcgggcaaaaacttgatggcggtaag
gggcactcaggaaccgggcttttacccgtcgacagtgatggagagtccgctcgaaacttc
agcgacggcggcggcgtgatcaaggctcgtctctcacagaccgttattaagttcggtgag
atggaagtagaaagcccagtcttcgacacctccgacaaacgcctgcaacctgaatacgca
accgggtggctcttacaaagtgacgagcttgccggcatacacttggtcggtggcaaattc
acagcattcaaaaaccaggactcctcctcttccaaaggggattttgctgggtatggcgtt
aacaccgatgtgggctcaatcagcttcgttggagctgacttcacgtccaacaagaaccta
ggtgccaggctctatgcctcccagctaacagacacttggaggcagtattacgccaacgtg
tacgcccgtcgcggggatacgtttgtagatttcaacatctaccgtacggttgactacggg
cgctctgccgcaggagccatcagcacaacagcttatagcctttctgccaaacacaacatt
ggcagccaagcctttaccctggcggcccaaaaaattcatggtgacacacctttcgatttc
gtagggggcgactccatatacctggccaactccatcaagttcgccgatttcaatggcgcc
catgagagctcctaccaagcccgctacgacctagattttgcatccatgggctttcctgga
ctcaagttcatgtcacggtatgtgactggacgtgatatcgacggcactcatgcgccgcaa
ggaggggcctacttcccttttgatacgagcgaacaggactttgtccctcagcaaggcaaa
ggcggaaagcactgggagcgtgacattgatctgagctacaccgtccagttcgggccggcg
aaagatcttttactgcatttcacccacgtctctcatcgggcgaatgaagcacaaggcggg
ccggacatcgaccgcatttactttgtcgttgagtacaacttcaaactgctgtga
DBGET
integrated database retrieval system
