Pseudomonas frederiksbergensis: PFAS1_20600
Help
Entry
PFAS1_20600 CDS
T04786
Name
(GenBank) porin
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_20600
Transporters [BR:
pfk02000
]
Other transporters
Pores ion channels [TC:
1
]
PFAS1_20600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprF
OmpA
OMP_b-brl
DUF748
TSP_3
Motif
Other DBs
NCBI-ProteinID:
APV41636
LinkDB
All DBs
Position
4425858..4426892
Genome browser
AA seq
344 aa
AA seq
DB search
MKLKNTLGLAIGSLIAATSFGALAQGQGAVEIEGFAKKEMFDSARDFKNNGNLFGGSIGY
FLTDDVELRLAYDEVHNARAEDGRNIKGSNTALDALYHFNNPGDMLRPYVSAGFSDQSIG
QNGSGGRNGSTFANVGGGAKLYFTDNFYARAGVEAQYNIDQGDTEWAPSVGIGVNFGGGS
KPAAAPVPAPAEVCADSDNDGVCDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDF
DKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHTDSVGPDAYNQKLSERRANAVKNVLTN
QYGVESSRVQSVGYGESRPVADNATKAGQAVNRRVEAQVEAQAK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaaaacaccttgggcttggccattggttctcttattgctgccacttcgttc
ggcgctctggcacaaggccaaggcgcagttgaaatcgaaggcttcgctaagaaagaaatg
ttcgatagcgctcgtgacttcaagaacaacggcaacctgttcggcggttcgatcggttac
ttcctgaccgacgacgttgaactgcgtctggcctacgacgaagtgcacaacgcacgtgcc
gaagatggccgtaacatcaagggctccaacaccgctctggatgctctgtaccacttcaac
aacccgggcgacatgctgcgtccgtacgtatcggctggcttctccgaccagagcatcggt
cagaacggttccggtggtcgtaacggttccaccttcgccaacgttggcggcggtgccaag
ctgtacttcaccgacaacttctacgcccgtgctggcgttgaagctcagtacaacatcgac
cagggcgacaccgagtgggctccaagcgtcggtatcggtgtgaacttcggtggcggctcc
aagcctgctgctgctccagttccagcaccagctgaagtctgcgccgacagcgacaacgat
ggcgtttgcgacaacgttgacaagtgcccggacaccccagccaacgtaactgttgacgct
gatggctgcccagcagttgctgaagttgttcgtgttgagctggacgtgaagttcgacttc
gacaagtcggtagtcaagcctaacagctacggcgacatcaaaaacctcgctgacttcatg
aagcagtacccatcgaccagcactactgttgaaggtcacactgactccgtcggtcctgac
gcttacaaccagaaactgtccgagcgtcgtgcaaacgccgttaagaacgttctgaccaac
cagtatggtgttgaatcgtcccgcgttcagtctgttggctacggcgaatcccgcccagtt
gctgacaacgctactaaagctggccaagctgtaaaccgtcgcgtagaagcgcaggttgaa
gctcaagctaagtaa
DBGET
integrated database retrieval system
