Pseudomonas frederiksbergensis: PFAS1_20715
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Entry
PFAS1_20715 CDS
T04786
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pfk03036
]
PFAS1_20715
Chromosome and associated proteins [BR:
pfk03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
PFAS1_20715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
APV41658
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Position
4457536..4461024
Genome browser
AA seq
1162 aa
AA seq
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MRLKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES
MTDVIFNGSTSRKPVSQASIELVFDNSDGTLLGEYAAYAEISIRRKVTRDSQTTYYLNGT
KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIESKPEDLRNFIEEAAGISKYKERRRET
ENRIRRTHENLARLTDLREELERQLERLYRQAEAAKKYQEYKGEERQLKAQLSALRWQAL
NEQVGQREAIIGNQEVTFEALVAEQRNADAAIERLRDGHHDLSERFNLVQGRFYSVGGDI
ARVEQSIQHGQQRLRQLQDDLKEAERARLETESHLGHDRTLLLTLGEELDMLTPEQEITS
AAAEEAAAALEESETTMHAWQEQWDTFNLTAAEPRRQSEVQQSRIQQLETSMERLADRQK
RLGEERALLSADPEDAAIMELSEQLAESEATLEDLQTSEQAQVEKLEQLRQELQHALTAQ
QQAQGDLQRLNGRLASLEALQQAALDPGTGTAEWLREQNLADRPRLAEGLKVDAGWELAV
ETVLGADLQAVLVDDFGDFDLAGFAQGDLRLLSPGSDGVRVASSLLDKVEAQIDLSPWLG
QVKPVDSLEQALALRGQLAPGESLISRDGYWVGRHFLRVRRASEAESGVLARGQEIQRLG
LEREEREATVETLETQLQNLRAQQRQQENGREHLRRLLQDEARQQGELKAQLSAGKAKAE
QLTLRRTRLDEELTELAEQRALEHENIGEARLQLQEALDSMALDTEQRELLLAQRDSLRE
RLDRVRQEARQHKDHAHQLAVRLGSLKAQHDSTRQALERLEMQSERLTEKREQLSLNLEE
GEAPLEELRLKLEELLDKRMTVDEELKTAQIALEDADRELRDAEKRRNQAEQQSQLIRGQ
METQRMEWQALTVRRKTLEDQLLEDGYDLHGVLATLVADANEKDAEEELERIAARIQRLG
AINLAAIDEYQQQSERKRYLDAQNDDLVEALDTLENVIRKIDKETRNRFKDTFDQINGGL
QALFPKVFGGGRAYLELTGEDLLDTGVTIMAQPPGKKNSTIHLLSGGEKALTALALVFAI
FKLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSQTVQFIYITHNKIAMEMAEQLMGVTM
HEPGCSRLVAVDVEEAMAMVDA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgcggctaaagtgcatcaagctggcggggttcaagtccttcgtcgacccgaccacggtg
aacttccccagtaacatggcggcggtggtcgggcccaatggttgcggcaagtcgaacatc
atcgacgccgtccgctgggtgatgggcgagagttcggccaagaacctgcgcggcgagtcg
atgaccgacgtcatcttcaacggctcgaccagccgtaaaccggtgagccaggcgagcatc
gagctggtgttcgataactccgacggcaccctgctcggcgaatacgcggcctacgcggaa
atttccattcgccgcaaagtgacccgcgacagccagaccacttactacctcaacggcacc
aaatgccgccgtcgcgatatcactgacatctttctcggtaccggcctgggcccgcgcagc
tactcgattatcgagcaggggatgatctccaagctgatcgagtcaaaacccgaagacctg
cgcaacttcattgaagaagcggcgggcatctccaagtacaaggagcgccggcgcgagacc
gaaaaccgcattcgccgcacccacgaaaacctggcccgcctgaccgacctgcgcgaagag
ctcgagcgtcagcttgaacgcttgtaccgccaggccgaggccgccaagaagtatcaggaa
tacaagggcgaggagcgtcagctcaaggcccaattgtcggccctgcgctggcaggcgttg
aatgaacaggtcggtcagcgcgaagcgatcatcggcaatcaggaagtcaccttcgaagcg
ttggtggccgaacagcgtaatgccgatgcggctatcgaacgcttgcgggacgggcatcac
gacctgtccgaacgcttcaatctggtgcaggggcgcttctattcggtcggcggcgacatt
gcccgggttgaacaaagcatccagcacggtcaacaacgcctgcgccaactgcaggacgat
ctgaaagaagccgagcgtgcgcgcctggaaaccgagtcgcacctgggtcacgaccgcacc
ttgctgctgaccttgggcgaagagctggacatgctcacccccgaacaggaaatcaccagc
gccgccgccgaagaggctgccgccgcgctggaagaatccgaaaccaccatgcacgcctgg
caagagcaatgggacaccttcaacctgacggccgccgaaccgcgtcgccaatccgaagtt
cagcagtcgcgcatccagcagctggaaaccagcatggagcgcctggctgatcgtcagaaa
cgcctcggcgaagagcgggccttgctctcggcagacccggaagatgcggcgatcatggag
ctcagcgagcagctcgctgaatccgaagcgacgcttgaggatttgcagaccagtgaacaa
gctcaggtcgaaaagcttgaacaactgcgtcaggaattgcagcacgcgctgacggcgcag
caacaggctcagggcgatttacagcgtctgaacggtcgcctcgcctcccttgaagcctta
caacaagccgcactcgatccgggcaccggcaccgccgaatggttgcgtgaacagaatctg
gccgaccgaccgcgtctggccgaaggcctgaaagtcgacgccggttgggagttggcggta
gaaaccgtgctcggcgccgacctgcaagcggtgctggtggatgacttcggcgatttcgat
ctggccggttttgcccagggcgatttacgcttgctcagtcccggcagcgatggcgtgcga
gtggcgagcagcttgctcgataaggtcgaggcgcagattgatttgtcgccatggctgggg
caggtcaaaccggtcgacagtcttgaacaggctttggccttgcgtggtcaattggcacct
ggcgaaagcctgatcagtcgcgatggttattgggtcggtcggcactttttacgtgtccgc
cgtgccagcgaagcggaaagcggcgtgctggctcgtggtcaggaaatccagcgtctgggc
cttgagcgcgaagagcgcgaagccacggtcgaaaccctggaaacccaacttcagaacctc
agggcgcaacagcgtcagcaggaaaacggtcgcgagcatctgcgccgtctgctgcaagac
gaagcccgtcagcaaggtgagttgaaagcccagttgtccgccggcaaagccaaggccgaa
caactgaccttgcgccgtacacgcctggacgaagagctcacggagttggctgagcaacgc
gctctggagcacgaaaatatcggcgaggcgcgtctgcaattgcaggaagccctcgacagc
atggcgctggacaccgagcagcgcgagttactgctggcccagcgcgacagcttgcgcgag
cgactcgatcgggtgcgccaggaagcccggcagcacaaggatcacgcccatcaactggcg
gtgcgtctgggttcgctcaaggcgcagcacgactcgacgcgtcaggcgctggagcggctg
gaaatgcaatccgagcgcctgaccgagaagcgcgaacagctcagtctgaacctggaagag
ggcgaggcgccgctggaagaactgcggttgaaacttgaagaactgctcgacaagcgcatg
accgtcgacgaagaactcaagacggcgcagatcgctctggaagacgctgaccgcgaattg
cgcgatgcggaaaaacgtcgcaaccaggccgagcagcaatcgcagttgattcgggggcag
atggaaacccagcgcatggaatggcaggccctgaccgtgcgccgcaagaccttggaagat
cagttgctggaagacggttacgacctccacggcgtgctcgccaccctggtggccgacgcc
aacgagaaagacgccgaagaagaactcgaacgcatcgccgcgcggattcagcgtctcggt
gcgatcaacctggcggccattgacgaatatcagcaacaatccgagcgtaaacgttatctg
gatgcgcagaacgacgatctggtggaagcgctggacacgctcgagaacgtgattcgcaag
atcgacaaggaaacccgaaaccgcttcaaagatacctttgatcagatcaatggcggttta
caggcccttttcccaaaagttttcggtggaggacgcgcgtatttggaactgacgggcgaa
gatctactcgatacaggggtaacgatcatggcgcagccgccaggaaagaagaacagcacc
atccatttgctctccggtggcgaaaaagccctgacagccctggctctggtttttgccatc
ttcaagttgaatccggcgccgttttgcatgctcgatgaggttgacgcgccattggatgac
gctaacgttggacgctacgcacggctggtcaaggagatgtcgcagacggtgcagttcatc
tatatcacccacaacaagatcgccatggaaatggccgagcaactgatgggggtgacgatg
cacgagccgggttgctcgcgtctggtggcagtggatgtcgaggaggcgatggcgatggtg
gatgcctga
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integrated database retrieval system
