Pseudomonas frederiksbergensis: PFAS1_20790
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Entry
PFAS1_20790 CDS
T04786
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00860
Porphyrin metabolism
pfk01100
Metabolic pathways
pfk01110
Biosynthesis of secondary metabolites
pfk01240
Biosynthesis of cofactors
Module
pfk_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PFAS1_20790
Enzymes [BR:
pfk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
PFAS1_20790
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Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
APV43209
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All DBs
Position
complement(4477203..4478585)
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AA seq
460 aa
AA seq
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MLDAIRWDTDLIRRYDLAGPRYTSYPTAVQFDGQVGTFDLFHALRDSRKALRPLSLYVHV
PFCANICYYCACNKVITKDRGRAQPYLQRLEQEIQLIACHLDPAQKVEQLHFGGGTPTFL
SHDELRQLMAQLRKNFNLLDDDSGDYGIEIDPREADWSTMGLLRELGFNRVSIGVQDLDP
AVQRAVNRLQSLEETRAVIDAARTLQFRSINIDLIYGLPRQTPENFARTVDEVINLQPDR
LSVFNYAHLPERFMPQRRINSDELPTPAQKLEMLQGTIEQLTKAGYRYIGMDHFALPDDE
LAIAQEESTLQRNFQGYTTHGHCDLIGLGVSAISQIGDLYCQNSSDLNQYQNTLASAQLA
TNRGLLCNADDRLRRAVIQQLICSFSLEFAEIEHAFNIDFQGYFGELWPQLQAMAADGLI
ELDNERINVLPAGRLLVRSVCMVFDAYLEQHNRQRFSRVI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgccattcgttgggataccgatttgatccgccgttacgacctggcgggaccg
cgctacacctcctacccgaccgcggtgcaattcgacggccaggtaggcacgttcgacctg
ttccacgccctgcgcgacagccgtaaagccctgcgcccgttatcgctgtatgtgcacgtg
ccgttctgcgcgaacatttgctactactgcgcctgcaataaagtcatcaccaaggaccgc
ggccgggcccagccctatttgcagcgccttgagcaggaaatccagctgatcgcctgccac
ctcgatcctgcacagaaagtcgagcaactgcactttggcggcggcactccgacttttctc
agtcacgatgaactgcgccagttgatggcccagttacgcaagaacttcaacttgctggac
gacgattccggcgactacggcatcgaaatcgacccccgcgaagccgactggtcgaccatg
ggcctgcttcgtgaactgggtttcaaccgggtcagtatcggcgtgcaagacctcgacccg
gcagtgcaacgagccgtcaatcgcctgcaaagcctggaggaaacccgggcggtgatcgac
gctgcccgcacgctgcagtttcgctcgatcaacattgacctgatctacggtttgccaagg
cagacacccgagaattttgcccgcacggttgatgaggtgatcaacctgcaaccggaccgt
ctctcggtattcaactacgcgcacctgccggagcgcttcatgccgcaacggcgaatcaac
agcgacgaactgccgacacccgcgcaaaaactggaaatgctccagggcaccatcgagcag
ctgaccaaggccggttatcgctacatcggcatggaccacttcgcgctgcctgacgatgaa
ctggcgattgctcaggaagagtcgaccctgcaacgcaacttccagggctacaccacccac
ggtcattgcgacctgattggcctgggcgtatcggccatcagccagatcggcgacctgtat
tgccagaacagcagcgacctgaatcagtaccagaacacgctggccagcgcgcaactggcc
accaaccgtggcttgctgtgcaacgccgatgaccgcctgcgacgtgcggtcatccagcaa
ctgatctgcagtttcagcctggagttcgccgagatcgaacacgccttcaacatcgacttt
cagggttacttcggcgaactctggccccagttgcaggcaatggctgcagacggcctgatc
gaactggataacgaacggatcaacgtattgcccgccggacgattgttggtgcgctcggtg
tgcatggtgttcgacgcgtacctggaacagcacaatcgccagcggttttcgcgggtgatc
tag
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