Pseudomonas frederiksbergensis: PFAS1_20940
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Entry
PFAS1_20940 CDS
T04786
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00071
Fatty acid degradation
pfk00280
Valine, leucine and isoleucine degradation
pfk00310
Lysine degradation
pfk00362
Benzoate degradation
pfk00380
Tryptophan metabolism
pfk00410
beta-Alanine metabolism
pfk00640
Propanoate metabolism
pfk00650
Butanoate metabolism
pfk00907
Pinene, camphor and geraniol degradation
pfk00930
Caprolactam degradation
pfk01100
Metabolic pathways
pfk01110
Biosynthesis of secondary metabolites
pfk01120
Microbial metabolism in diverse environments
pfk01200
Carbon metabolism
pfk01212
Fatty acid metabolism
Module
pfk_M00087
beta-Oxidation
pfk_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PFAS1_20940
00650 Butanoate metabolism
PFAS1_20940
09103 Lipid metabolism
00071 Fatty acid degradation
PFAS1_20940
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PFAS1_20940
00310 Lysine degradation
PFAS1_20940
00380 Tryptophan metabolism
PFAS1_20940
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PFAS1_20940
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PFAS1_20940
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PFAS1_20940
00930 Caprolactam degradation
PFAS1_20940
Enzymes [BR:
pfk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PFAS1_20940
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PFAS1_20940
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PFAS1_20940
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PFAS1_20940
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
APV41699
UniProt:
A0A1P8EZP8
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All DBs
Position
4512480..4514627
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AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVENFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRPEDAL
KVGAVDAVVAPEKLQEAALELIKRAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEANGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKEVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVESKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYETDKRGKQ
KKVADPSVLEVLKPIVFEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSMGVAEFVALADQYADLGALYHPTAKLREMAKTGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaactg
cgtcaggccgtagacaccatcaaggcagatgcttcgatcaagggtgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgagaacttcaagctg
cctgatgcagagcttgttgctggcaatctggaagccaacaagattttcagcgatttcgaa
gacctcaacgtcccgactgtcgccgcgatcaacggcatcgccctgggcggcggtctggaa
atgtgcctggcggcggattaccgcgtcatgtccaccaaggccaagatcggcctgccggaa
gtcaagctgggcatctacccgggcttcggcggtaccgtgcgcctgccgcgcatcatcggt
gccgataacgccatcgaatggattgccgccggcaaggaaaaccgccctgaagacgcgctg
aaagtcggcgcagtcgacgcagtggttgcccctgagaaactgcaggaagctgctctggag
ctgatcaaacgcgccatttccggcgagttcgactacaaggccaagcgtcagccgaagctc
gaaaagctcaagctcaacgccattgaacagatgatgtcgttcgaaaccgccaagggtttc
gtggccggtcaggcgggcccgaactacccggcaccggtcgaagcgatcaagactatccag
aaagccgctaacttcggtcgcgacaaggctctggaagtcgaagccaatggtttcgtcaaa
ctggccaagacctctgccgcgcagagcttgatcgggctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggaagtgaagcaggctgccgtattg
ggcgcaggcatcatgggcggcggtatcgcttatcagtcggcctccaaaggtacgccgatc
ctgatgaaagacatcaacgagcacggcatcgagcaaggtctggcagaagctgccaaattg
ctggtgggccgcgttgataaaggtcgcatgaccccggcgaaaatggccgaagtgctcaat
ggcattcgtccaaccctgtcctacggtgatttcggtcacgtcgacctggtcgtcgaagcc
gttgtcgagaatccgaaggtcaagcaagccgttctggctgaagtcgaaagcaaggtcaaa
gaggacactatcctcgcgtccaacacctcgaccatttccatcagcttgctggccaaagcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtgatccgtggcgagaagtccagcgaagtggccgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgtgtgctgttcccgtacttcggcggtttcgccaagctggtcagcgccggcgtagat
ttcgtgcgcatcgacaaggtcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggtcaccacggtcgcgacgtgatggctgaaggcttc
ccggaccgcatgaaagacgaccgtcgttcggccatcgacgtgctctacgaagccaagcgg
ctgggtcagaaaaacggcaagggcttctacgcctacgagactgacaaacgcggcaagcag
aagaaagtcgccgatccgtcggtactggaagtgcttaagccaatcgtgttcgaacagcgt
gaagtcaccgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcattgtcgaaaccgctgccgaagccgacatgggcctggtctac
ggtatcggtttccctccattccgtggcggtgcgctgcgctacatcgattcgatgggtgtt
gcagagttcgttgccctggctgaccagtacgctgatttgggcgcgctgtaccacccgacc
gcaaaactgcgcgaaatggccaaaaccggccagcggttcttcggttaa
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