Pseudomonas frederiksbergensis: PFAS1_21275
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Entry
PFAS1_21275 CDS
T04786
Name
(GenBank) tRNA dihydrouridine(16) synthase DusC
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfk03016
]
PFAS1_21275
Transfer RNA biogenesis [BR:
pfk03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
PFAS1_21275
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
APV41758
LinkDB
All DBs
Position
4583728..4584687
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AA seq
319 aa
AA seq
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MQIALAPMEGLVDNILRDVLTRVGGIDWCVTEFIRINDQLLTPAYYHKFGPELLTGARTA
SGVPLRVQLLGSDPVCLAENAALACELGSEVIDLNFGCPAKTVNKSRGGAVLLKEPELLN
QIVEHVRRAVPAHIPVTAKMRLGFDSPDGALVCATALAEGGAAHIVVHARTKTDGYKPPA
HWEWIPRVQDVVKVPVFANGDIWSVEDWRRCREISGVEDIMLGRGLVSRPDLARQIAMAR
AGEDVVEMTWAQLLPLIQDFWLQAKAQMTARQSPGRLKQWLAMLTRNYPEAVELFTVLRR
ETELDQVSRLLGLQVSEAA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattgctttggcgcccatggaggggttggttgacaacatcctgcgggacgtgctg
actcgtgtgggcggtatcgattggtgcgtgaccgagttcattcggatcaacgatcaactg
ctcacgcctgcctattaccataaattcggcccggaactgctgaccggcgcccgcaccgca
tccggtgtgccgctgcgggtgcaactgctcggttccgatccggtatgcctggcggaaaac
gccgcgctggcctgcgaactgggatcagaggtcatcgacctgaacttcggctgtccggcc
aagaccgtgaacaagtcccgcggcggcgccgtgctgctcaaagagcctgagctgctgaac
cagatcgtggaacatgtacgtcgcgccgttccggcgcacattccggtgacagccaagatg
cgcctcggttttgacagccccgacggtgcgctggtgtgtgccacggccctggccgaaggt
ggcgcggcgcacatcgtggttcacgcgcggaccaaaacagacggctacaagcccccggcc
cattgggagtggatcccccgggtgcaggatgtggtcaaggtgccggtgttcgccaatggc
gacatctggagcgtcgaggattggcgtcgttgccgtgaaatcagcggcgttgaggacatc
atgctcggtcgcggcctggtttcgcgcccggacctggcacggcaaatcgcaatggcgcgg
gccggtgaggacgtcgtcgagatgacctgggcccaattgctgccgctgattcaggacttc
tggctgcaagccaaggcgcagatgacagcccgccaatcgccgggtcgcttgaagcagtgg
ctggcaatgctgacccgcaattatcccgaagcggtcgagctgtttaccgtgctgcgtcgt
gagaccgaactggatcaggtctcgcgtttactgggcttgcaggtgtccgaagccgcctga
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