Pseudomonas frederiksbergensis: PFAS1_21330
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Entry
PFAS1_21330 CDS
T04786
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfk03016
]
PFAS1_21330
Enzymes [BR:
pfk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PFAS1_21330
Transfer RNA biogenesis [BR:
pfk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PFAS1_21330
Prokaryotic type
PFAS1_21330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
APV43214
LinkDB
All DBs
Position
4599446..4600270
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AA seq
274 aa
AA seq
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MAAEGFFRIALGVEYKGSRYRGWQRQASGVLTVQETLEKALSKVADSPVSLLCAGRTDAG
VHACGQVVHFDTQVERSMKAWVMGANINLPHDVSVSWAKVMPAHFHARFKAIARRYRYVI
YNDQIRPAHLNEEITWNHRPLDVERMAEAAQYLVGTHDFSAFRAGQCQAKSPIKELHHLR
VTRHGKMIVLDIRASAFLHHMVRNIAGVLMTIGAGERPVEWMKEVLESRIRRSGGVTAHP
YGLYLVQVEYRDEFQLPERYIGPHFLTGFSELDG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
ctggcggccgagggctttttccggatcgcgttgggcgttgaatacaaaggctcgcgctat
cgcggctggcagcgccaggcctccggcgtactcaccgtgcaggagacgctcgaaaaggcc
ttgtccaaagtcgccgactcaccggtgtcactgctctgcgccgggcgtacggatgccggc
gtgcatgcgtgcggtcaggtggtgcatttcgatactcaggtcgagcgttcgatgaaagcc
tgggtcatgggcgccaatatcaatttgcctcacgacgtcagtgtcagctgggccaaggtc
atgccggcgcatttccatgcgcggttcaaggccattgcccgacgctatcgctacgtgatc
tacaacgatcagatccgtcctgcgcacctgaacgaagaaattacctggaatcaccgtccg
ctggacgtcgagcgcatggccgaggcggcgcagtacctggttggcacccacgatttcagc
gctttccgtgccggccagtgtcaggccaagtcgccgatcaaggagctgcatcacctgcgc
gtcacgcgccacggcaagatgatcgtgctggacatccgcgccagcgccttcctgcaccac
atggtgcgcaacattgctggcgtgctgatgacgatcggtgccggcgagcgcccggtagag
tggatgaaagaagtgctggagagtcgtattcgtcgttccggtggggtgacggcgcacccg
tacggcctgtacctggtgcaggtcgagtaccgcgacgagttccaattgcccgagcgttac
atcgggccgcacttcctgaccggtttctcggaacttgacggctga
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