Pseudomonas frederiksbergensis: PFAS1_22015
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Entry
PFAS1_22015 CDS
T04786
Name
(GenBank) Fis family transcriptional regulator
Organism
pfk
Pseudomonas frederiksbergensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_4
AAA_5
HTH_8
AAA_2
AAA
Mg_chelatase
PAS
PAS_9
MLTR_LBD
HTH_23
Xre-like-HTH
HTH_28
AAA_16
HTH_22
HTH_11
HTH_29
PAS_8
HTH_36
MCM
HTH_Tnp_ISL3
HTH_Tnp_1_2
HTH_20
HTH_10
HTH_24
Motif
Other DBs
NCBI-ProteinID:
APV41880
UniProt:
A0A1P8F087
LinkDB
All DBs
Position
complement(4717490..4718815)
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AA seq
441 aa
AA seq
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MKTILLTSDNSLPHPDQVQSLVSFLEHEPQPMIVLDPEYNILAANTAYQRQFGSADKPFI
GHKCYQISHHYDVPCDQAGENCPMKKAQEMRGPDRVLHIHHTPRGPEHVDVELRPILDEH
GVITAYVERLTLVRSASARPSNEGMVGCSPAFNLALSELQRVAPSMLPVLLLGESGTGKE
LFARAVHETSERATGPFVVVDCSGLTETLFESELFGHEKGAFTGATTRKPGLVETAQGGT
LFLDEIGDVPLAMQVKLLRLIESGTYRRVGSVETLHANFRLIAATHKPLEKMMERGEFRQ
DLYYRISAFPIQLPPLRNRVEDIGLLVNSFLQRAGTGKRRLTIDADALTQLQRFSWPGNI
RELRNVLERASLFADDGVIRSIHLPQACVVMPPQSSTSTPFDGSTLVQALATFKGTRSEL
AKHMGISERTLYRRLKEQGLA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccatcctgctcacctcagacaactcactcccacacccggatcaagtgcagtca
cttgtttcgtttcttgaacacgaaccacagccgatgatcgtgctcgatccggagtacaac
atcctggctgccaacactgcctatcagcggcagtttggcagcgctgacaaaccctttatc
ggtcataagtgttatcaaatctcacaccattacgatgtcccttgtgatcaggcgggtgag
aattgtccgatgaaaaaggcgcaggaaatgcgcgggccggatcgtgttttgcacattcac
cacacgcctcgcggtcctgagcatgtcgacgtcgaattgcgcccgattctagacgagcac
ggagttattactgcctatgtggagcgtctcactctggtccgaagcgcctcagcgcgaccc
agcaacgaggggatggtgggctgttcaccagccttcaacctcgccctgtctgagctgcag
cgggtcgcaccttcaatgctgccagttctgctgttaggcgagtccggtacgggcaaagag
ttgttcgctcgcgcggtacatgaaaccagcgagcgggccactggaccctttgtagtcgta
gattgctcaggattgaccgaaacgttgtttgagagcgagctgttcggccatgaaaaagga
gcattcaccggtgccaccacgcgcaagcctggtttggtcgaaacggcccagggtggcacg
ttgttccttgatgagattggcgatgttccgctggcaatgcaggtgaaactgttgcgcctg
atcgaatcgggcacctatcgccgtgtcggcagtgtcgagacccttcacgccaacttcagg
ttaattgctgcgacccacaaaccactggaaaaaatgatggagagaggtgagttcaggcag
gacctgtactaccgcatcagcgcctttccaattcagttaccccccttgcgtaaccgagtt
gaagacattggtttgcttgtgaattcatttctacaacgtgccggtacaggcaagcgccgg
ctgacgatagatgcggatgctctgacacaattgcagcggttttcctggcccggcaatatc
cgtgaattacgcaatgttctagaaagagccagtctgttcgctgacgatggagtgatccgc
tccatacatttaccccaggcttgcgtcgtgatgcctcctcagtcctcgacttccacccct
ttcgacggcagcacgctggtacaggcactcgctacttttaaaggtacccgcagtgagctg
gccaagcacatggggattagcgagcgtactttgtacagacgactgaaagaacaaggtttg
gcctag
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