Pseudomonas frederiksbergensis: PFAS1_22360
Help
Entry
PFAS1_22360 CDS
T04786
Name
(GenBank) DUF1338 domain-containing protein
KO
K25986
2-oxoadipate dioxygenase/decarboxylase [EC:
1.13.11.93
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00310
Lysine degradation
pfk01100
Metabolic pathways
pfk01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
PFAS1_22360
Enzymes [BR:
pfk01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.93 2-oxoadipate dioxygenase/decarboxylase
PFAS1_22360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGLS
Metal_resist
Motif
Other DBs
NCBI-ProteinID:
APV41936
LinkDB
All DBs
Position
complement(4788247..4789638)
Genome browser
AA seq
463 aa
AA seq
DB search
MSHPNFISPDLIRQRFSKAMSDMYREEVPLYGALMELVEQTNRHVLDSDPHIARQLHSTG
EIQRLDLERHGAIRVGTADELATLARLFAVMGMQPVGYYDLTPAGVPVHSTAFRAVHEAA
LQVSPFRVFTSLLRLELIEDLELRAFAQSVLDKRSIFTPTALSLIDRAETQGGLTEQEAR
DFVEQALETFRWHHTATVTAEQYRKLCAQHRLVADVVAFTGPHINHLTPRTLDIDIVQAQ
MPVHGITPKAVIEGPPRRQCPILLRQTSFKALDEPVAFTDQTRTHGSHSARFGEIEQRGA
ALTPKGRALYDRLLNAARDELKDFPSEANAARYNALMAQHFAQFPDTLEGMRREELAYFR
YFVTEKGLGADELKSWSLEDLLSGGYLRVEPLVYEDFLPVSAAGIFQSNLGDAAQTHYGV
QSNRQVFEMALGRSTIDELALYAETQRRSIEECREAMGLASLA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatccgaacttcatcagccctgacctgatccgccaacgcttttccaaagcgatg
tccgacatgtaccgcgaagaagtgccgctgtatggcgcgctgatggaactggtggaacag
accaaccgtcacgtgctggacagcgatccgcacatcgcccgacagttgcacagcaccggt
gaaatccagcgcctggacctggagcggcatggcgcgatccgtgtcggcaccgccgatgaa
ctggcgaccctcgcccgactgtttgcggtgatgggcatgcaaccggtgggttattacgac
ctgaccccggccggcgtaccggtccactccacggcttttcgcgcggtgcatgaggcggcg
ctacaggtcagcccgttccgggtattcacctccctgctgcgtctggaactgatcgaagac
ctggaactgcgagcgttcgcccagtcggtgctggacaagcgttcgatcttcacacccacc
gcgctaagcctcatcgaccgcgccgaaacccagggcggtcttacggaacaggaagcccgg
gacttcgtcgaacaggcactggaaacgttccgctggcaccacaccgccaccgtgaccgcc
gagcagtaccgcaagctctgcgcccagcatcgcctggtcgccgacgtggtagcgttcacc
ggcccgcatattaaccacctgacgccgcgcaccctggacatcgacatcgtccaggcgcaa
atgcctgttcacggcatcacccccaaagcggtgatcgaaggcccgccccgccgtcagtgc
ccgatcctgctgcgccagaccagtttcaaagccctggacgagcctgtcgccttcaccgat
cagacccggactcacggcagccacagcgcccgtttcggcgagatcgaacaacgcggcgcg
gcgctcacccccaaaggccgggcgctttacgaccgattgctcaacgctgcccgtgatgaa
ctgaaagacttccccagtgaggccaatgctgcacgttacaacgcgctgatggcgcagcac
tttgcgcaattccctgacacccttgagggcatgcgccgagaggaactggcgtacttccgc
tacttcgtcacggaaaaagggttgggggcggacgaattgaaatcctggtcgctggaggat
ctgctcagcggcggctatttgcgggttgagccgttggtgtacgaagatttcctgcctgtc
agcgctgcggggatttttcagtcgaacctgggagatgccgcgcaaacccactatggcgtg
caatcgaaccggcaggtgttcgagatggcgctggggcgatcgacaattgatgaattggcg
ttgtatgccgagacgcaacgacgctcgatcgaggaatgccgcgaggcaatgggattggcg
agtctggcttga
DBGET
integrated database retrieval system
