Pseudomonas frederiksbergensis: PFAS1_22860
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Entry
PFAS1_22860 CDS
T04786
Symbol
benD
Name
(GenBank) 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
KO
K05783
dihydroxycyclohexadiene carboxylate dehydrogenase [EC:
1.3.1.25
1.3.1.-]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00362
Benzoate degradation
pfk00364
Fluorobenzoate degradation
pfk00622
Xylene degradation
pfk01100
Metabolic pathways
pfk01120
Microbial metabolism in diverse environments
pfk01220
Degradation of aromatic compounds
Module
pfk_M00551
Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PFAS1_22860 (benD)
00364 Fluorobenzoate degradation
PFAS1_22860 (benD)
00622 Xylene degradation
PFAS1_22860 (benD)
Enzymes [BR:
pfk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.1 With NAD+ or NADP+ as acceptor
1.3.1.25 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
PFAS1_22860 (benD)
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Motif
Pfam:
adh_short
adh_short_C2
KR
Epimerase
Polysacc_synt_2
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
APV42029
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Position
4887823..4888596
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AA seq
257 aa
AA seq
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MNRFTEKVALITGAAQGIGRRVAERMAAEGARLILVDRSELVFDVQQQLGQGSQVLALTA
DLEQYSECSRVMQTAVERFGRLDVLVNNVGGTIWAKPFEHYEASQIEAEVRRSLFPTLWC
CHAALPFMLEQGSGAIVNVSSIATRSVNRVPYGAAKGGVNALTACLAFETAGRGIRVNAT
APGGTEAPPRVIPRNSADQSEQEKVWYQQIVDQTLDSSLMKRYGTLDEQASAILFLASDE
ASYITGMIMPVGGGDLG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaacagattcacagagaaagtcgcgctgatcactggagcagcccaaggcattggtcgg
cgcgttgccgagcgcatggcggcggaaggtgcgcggttgattctggtcgatcgctccgaa
ctggtgttcgatgtccagcagcaattggggcagggcagccaggtgctcgcgctgactgcc
gatcttgagcaatacagcgaatgcagccgagtcatgcaaactgccgtcgagcgtttcggg
cgtctggatgtgctggtcaataatgtgggggggacgatctgggccaagccttttgagcat
tacgaagcgtcgcagattgaggctgaggtgcgccgttcactgtttccgacgctgtggtgc
tgtcatgccgcgctgccgttcatgctcgagcagggcagcggcgccatcgtcaacgtttcg
tccatcgccacgcgcagtgtcaatcgcgtgccgtacggtgcggcgaagggtggggtcaac
gcgctgaccgcttgcctggcgttcgaaaccgccggtcgcgggattcgggtcaatgccacc
gcgcccggtggcactgaagcgccgccgcgggtcattccgcgcaacagcgctgatcagagc
gaacaagagaaggtctggtatcagcagatagtcgaccagacgctcgacagcagtttgatg
aagcgctatggcacgctggatgaacaggcaagcgcaattctgtttctggccagcgacgaa
gcgtcttacattaccggcatgatcatgccggtcggtggcggcgacctcggttga
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