Pseudomonas frederiksbergensis: PFAS1_23700
Help
Entry
PFAS1_23700 CDS
T04786
Name
(GenBank) LysR family transcriptional regulator
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_23700
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PFAS1_23700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_AsnC-type
HTH_50
HTH_24
EcoRI
Motif
Other DBs
NCBI-ProteinID:
APV42176
UniProt:
A0A1H5EK39
LinkDB
All DBs
Position
complement(5027717..5028580)
Genome browser
AA seq
287 aa
AA seq
DB search
MDIDLARTFLEIVRHGSLAAAAEKLHVTQTAITARVQKLESQLGSTLFVRNRAGARLTPN
GEAFVVYANQLVETWEAARRDLPLPEGYRDVLHIGGEVSLCNPLMLSWAGALREKIPSHA
LRMEIRDGENLLRQLELGVLDAALVYQPEYWPRLQVEQVLEEKLVLIRLAARPDPYVYID
WGPDFRRQHDAALPEKAKAALSFNLGPLGLQYILENGGSGYFRTRVVQSYLQSGVLEQVP
KAPEFSYPTYLVYSRDRDSATLQQAFDLLREVIKSDDDWSQRWNPLT
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgatctcgcccgcacctttctggaaatcgtccgccacggcagccttgccgca
gccgccgaaaaactccacgtcacccagaccgcgatcaccgcgcgcgtgcaaaaactggaa
agccaactcgggagcaccctgttcgtgcgcaaccgcgccggtgcgcgtctgacgccgaac
ggtgaagccttcgtggtctacgccaatcaactggtcgaaacctgggaagcggcgcgccgg
gacttgccgttgcccgagggttatcgcgacgtgttgcacatcggtggcgaggtcagcctg
tgcaatccgctgatgctcagttgggccggcgcgctacgcgagaagatccccagccacgcc
ctgcgcatggaaatccgtgacggtgaaaacctgctgcgccagctggaactgggggtgctg
gatgcggcgctggtttaccagcccgagtattggccacgcttgcaagtcgaacaggtgctg
gaagaaaaactggtcctcatccgcctggccgcacgacctgatccctacgtgtacatcgac
tggggcccggactttcgccgtcaacacgatgcagccctgccggaaaaagccaaagccgcg
ctgagcttcaaccttggcccactgggcttgcagtacattctggaaaacggcggcagcggc
tactttcgcactcgggtggtccagagttatctgcaaagcggtgtgctggagcaagtgccc
aaagcccccgaattcagctacccgacctatctggtttactcccgcgaccgcgactcggcg
accctgcaacaagccttcgacctgctgcgcgaagtgatcaaatccgacgatgactggtcg
caacgctggaacccgctgacctga
DBGET
integrated database retrieval system
