Pseudomonas frederiksbergensis: PFAS1_24165
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Entry
PFAS1_24165 CDS
T04786
Name
(GenBank) AMP-dependent synthetase
KO
K01895
acetyl-CoA synthetase [EC:
6.2.1.1
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00010
Glycolysis / Gluconeogenesis
pfk00620
Pyruvate metabolism
pfk00630
Glyoxylate and dicarboxylate metabolism
pfk00640
Propanoate metabolism
pfk00680
Methane metabolism
pfk00720
Other carbon fixation pathways
pfk01100
Metabolic pathways
pfk01110
Biosynthesis of secondary metabolites
pfk01120
Microbial metabolism in diverse environments
pfk01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PFAS1_24165
00620 Pyruvate metabolism
PFAS1_24165
00630 Glyoxylate and dicarboxylate metabolism
PFAS1_24165
00640 Propanoate metabolism
PFAS1_24165
09102 Energy metabolism
00720 Other carbon fixation pathways
PFAS1_24165
00680 Methane metabolism
PFAS1_24165
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pfk01004
]
PFAS1_24165
Enzymes [BR:
pfk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
PFAS1_24165
Lipid biosynthesis proteins [BR:
pfk01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
PFAS1_24165
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
APV42258
LinkDB
All DBs
Position
complement(5133626..5135329)
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AA seq
567 aa
AA seq
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MNSNCQPFLAARDFLLAHRTDYATAVRDFRWPQLNEFNWALDYFDAMAEDNHANALWIVE
EDGSEQRYSFQQLASRSNQVANHLRALGVRRGERILLMLGNDVALWETMLAAFKIGAVVI
PATALLTPDDLGDRIERGQVRHLVVGSAHVDKFVGLGEGCSRICVGPAPAGWTPHSAASE
YSEQFDVEDRTLATDPMLLYFTSGTTSKPKMVLHSHQSYPVGHLSTMYWIGLQPGDLHLN
ISSPGWAKHAWSCLFAPWNAGACIFIHNVARFSAPALLGALERYGVTSLCAPPTVWRMLI
QEDLASYKERLNLRELVGAGEPLNPEIIEQILHAWDLPLRDGFGQSETTALVGNTPGQLL
KPGSMGRPLPGYRVTMLDPDGVPGNEGEVALPLDVRPLGLMLCYEDSPEKTAEVMRDGYY
RTGDTAQIDEEGYITFVGRADDVFKASDYRISPFELESALIEHPAVMEVAVVPSPDPLRL
AVPKAFLILAHDEPGSAELAGNILAFAREHLAPYKRVRRIEFVSELPKTISGKIRRVELR
QMEVQRRQSDARGAQEYFEEDFPHLKG
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaactgccaaccgttcctcgccgctcgagacttcctgctggcccaccgtacc
gactacgccactgccgtgcgtgacttccgctggccgcaactgaacgagttcaactgggca
ctggattacttcgatgccatggccgaggacaatcacgccaacgccttgtggatcgtcgaa
gaagacggcagcgaacagcgctacagcttccagcaactggcctcgcgctccaaccaggtg
gccaaccacttgcgtgccctcggcgtgcgccgcggcgagcgcatcctgctgatgctcggc
aatgatgtcgccttgtgggaaaccatgctggccgccttcaaaatcggcgccgtggtcatt
cccgccaccgccctgctgacccccgatgacctgggcgaccgcatcgagcgcggccaggtt
cgtcacctggtggtcggcagcgcccatgtcgacaagttcgtcggcctgggagaaggctgc
agccgcatctgcgtcggcccggcccccgccggctggaccccgcacagtgccgccagcgag
tattccgagcagttcgacgtcgaggaccgcacgctagccaccgacccgatgctgctgtac
ttcacctctggcactacctccaagccaaagatggtgctgcacagtcaccagagctacccg
gtcggccacctgtcaaccatgtactggattggcctgcagccgggtgacctgcacttgaac
atctcgtcaccgggctgggccaaacatgcctggagctgcctcttcgcaccatggaacgcc
ggcgcctgcatcttcatccacaacgtcgcgcgcttcagcgccccggccctgcttggcgcg
ctggagcgctatggcgtcactagcctgtgcgccccgcccaccgtgtggcgcatgctgatt
caggaggatctggccagttacaaggagcgcctgaaccttcgcgaactggtgggtgccggt
gagccactgaacccggagatcatcgagcagatcctgcatgcctgggacttgccgctgcgt
gatggtttcggtcagtcggaaaccaccgctctggtcggtaacacacccggccaactgctc
aaacccggctccatgggccgtcctctgccgggctacagggtgaccatgcttgaccccgac
ggcgtacccggcaacgagggagaagtagccctgccattggatgtgcgtccgcttggccta
atgttgtgctacgaggacagcccggaaaaaaccgcagaagtaatgcgcgacggttactac
cgcaccggcgataccgcacagatcgatgaagagggctacatcaccttcgtcggccgtgcc
gacgatgtgttcaaagcctccgactaccgcatcagtcccttcgagctggaaagcgcactg
atcgagcacccggcggtgatggaagtggccgtggtgccaagcccggacccgctacgcctg
gccgtgcccaaggcgttcctgatcctggcccatgacgaacccggcagtgctgaactggcc
ggcaacatcctcgccttcgctcgcgagcacctggcgccctacaagcgggtgcggcgtatc
gaattcgtcagcgaactgcccaagaccatctcagggaagattcgtcgggtggaattgcgg
caaatggaagtgcagcgccgccagagcgatgcacgcggcgcgcaagagtacttcgaagaa
gacttccctcacctcaagggctga
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