Pseudomonas frederiksbergensis: PFAS1_24230
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Entry
PFAS1_24230 CDS
T04786
Name
(GenBank) TetR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_24230
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PFAS1_24230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
DUF6262
Motif
Other DBs
NCBI-ProteinID:
APV42268
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All DBs
Position
5148815..5149408
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AA seq
197 aa
AA seq
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MHVRVTKAQAQANREHIVETASELFRERGFDGVGVSDLMAAAGFTHGGFYKHFGSKADLM
AEASACSLAKSLTGAQALDVPGFIGVYVTREHRDGRGSGCTMAALCGDAARQSDDLKATF
AEGIEHTLQTLGEKYPTGPDSAAGEGRKKMIDLLSRAVGAIILSRACPDDSALADEILEV
CRAEMFASLPNDDVEAV
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
ttgcacgtgagagtgaccaaggcccaggcgcaggccaatcgagagcacattgtcgagaca
gcctctgagctgttccgtgagcgtggctttgacggcgtcggtgtgtcggatctcatggcg
gctgccggtttcacccatggaggtttctacaagcatttcggttcgaaggccgacctgatg
gccgaagcctctgcttgcagtcttgccaagtcgctgacaggtgcccaagcgctcgacgtt
cccggcttcatcggcgtctatgtgacgagggaacatcgggacggacgtggcagcggttgc
accatggccgcgttgtgcggcgacgcggcgcgtcaatcggatgatttgaaagcgacgttt
gccgaagggatcgaacacactctccaaacgctgggggaaaaatatccgacggggccggac
tccgcggcgggtgagggaagaaagaaaatgattgacctgctgtcacgtgctgtcggcgcg
attattttgtcgcgtgcctgcccggatgattccgcgctggcggatgagatccttgaggtg
tgccgcgctgaaatgtttgcttcgttgccgaacgatgatgtggaagcggtttag
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