Pseudomonas frederiksbergensis: PFAS1_24340
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Entry
PFAS1_24340 CDS
T04786
Name
(GenBank) helix-turn-helix-type transcriptional regulator
KO
K22491
MerR family transcriptional regulator, light-induced transcriptional regulator
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_24340
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
MerR family
PFAS1_24340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR
HTH_17
Motif
Other DBs
NCBI-ProteinID:
APV42288
LinkDB
All DBs
Position
5169388..5170305
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AA seq
305 aa
AA seq
DB search
MTEPIESTSDDALLPMREVASLTGVNPITLRAWERRHGLIRPVRTVGGHRLYSQQDIEHI
RSIMLWTSRGLPISKIGALLVRQQDTPDATVSGSAEAPLVQWQEAVHRATQAFDGAELER
LHGQLFTIYPKATALEAILLPVWRSLASGNNFGRRSQWLFLDAFLRARMLLRLQMNQSNG
ACVLLADGSGHARELELLCAGLLMSSDQLRIEVLGTGQPLEELPLLCEAIQPAALVLLVQ
APLQEDALKRLRALQMGVTCPVALAGDAAAASSAGLRGSSIAILGNDEASILPRLEALVR
GTLQI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcccatcgaatccacctccgacgacgcattgctccccatgcgggaagtcgcc
agcctgactggcgtcaacccgatcaccttgcgggcatgggagcgccgccacgggctgatc
cgacccgtacgcactgtgggagggcatcgcctgtattcgcaacaggacatcgaacatatt
cgtagcatcatgctctggaccagccggggcctgcccatcagcaagataggcgctttgctc
gtccggcagcaggacacacccgatgccactgtatctggctcggccgaagctcccctggtc
cagtggcaagaggcagttcatcgtgccactcaggcttttgacggcgctgagctggagcgc
ctgcacgggcaactatttacgatctatccgaaagcaactgcactggaggctattctgctg
ccggtttggcgcagcctggcatccggtaataatttcggtcgacgcagtcagtggttgttc
cttgacgccttcttgcgtgcgcggatgttattgcgactgcagatgaaccagagcaacggt
gcttgcgtgctgctggcagacggctcgggccatgcgcgcgaattggagctgttgtgtgct
ggtttgttgatgagcagcgaccagcttcgcatcgaggtgttgggcacgggccagcctctg
gaagaactgccgttgctgtgtgaagcaattcagcccgccgcgctggtgctattggtccag
gcgccactgcaggaagatgcgctcaagcgactgcgcgcccttcaaatgggcgttacgtgc
ccagtggccttggccggcgacgcggctgccgcttcgtcggcagggttgcggggttcttcg
attgccattttgggcaatgacgaagcgagtattttgcccaggctggaagccttggtaagg
ggaacactgcaaatttga
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