Pseudomonas frederiksbergensis: PFAS1_24420
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Entry
PFAS1_24420 CDS
T04786
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFAS1_24420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_24420
Transporters [BR:
pfk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PFAS1_24420
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GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
RsgA_GTPase
AAA_29
MIT_C
DUF2158
AAA_22
Rad17
Motif
Other DBs
NCBI-ProteinID:
APV42302
LinkDB
All DBs
Position
complement(5181553..5182707)
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AA seq
384 aa
AA seq
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MSAVIKDSAQQNDKPLVSLRNLNKYYGDFAAVDDISLDIKDGEFLTFLGSSGSGKSTTLS
MLAGFETPSSGEIQVNGQSLVNVPPHKRDIGMVFQRYSLFPHLSVRENIAFPLAIRKLAA
SERERRVDAMLKLVQLEQFAHRRPSQLSGGQQQRVAIARALVYEPRILLMDEPLGALDKK
LREDLQDELRQLHRRLGITIIYVTHDQEEAMRLSQRIAIFSHGKIVGLGSGFDLYQNPPN
AFVASFLGNSNFLKLKAQGNAVASFEGQPLSIRLTAGLQTDQDVLLMVRPEKALALSVEQ
AAREPLAAGWNEVSATVVEVLFLGESQTCSVVTSGGTSMTVKALSAAGMPLKAGDPVRVR
WATADACVYTEWAESDLNKAAGAH
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgttatcaaagattccgcgcagcagaacgacaaaccgctggtcagcctgcgc
aacctgaacaagtactacggcgacttcgctgccgtggacgacatctcgctggacatcaag
gacggtgaattcctgaccttcctcggctccagcggttctggcaaaagcaccaccctgtcg
atgctcgccgggttcgaaaccccgagcagcggcgagatccaggtcaatggccaatcactg
gtcaacgtaccgccgcacaagcgtgacatcggcatggtgttccagcgttattcgctgttc
ccacatttgtcggtgcgcgagaacatcgcgttccccctggccatccgcaaactggccgcc
agcgagcgcgagcgccgggtcgacgccatgctcaaactggtacagcttgagcaatttgcg
catcgccgcccttcacaactttccggaggtcagcagcaacgggtggcgatcgctcgggcg
ctggtttatgaaccacgcattctgttgatggacgaacctctcggcgctttggacaaaaag
ctgcgtgaagacttgcaggatgaactgcgtcagctgcatcggcgtctgggcatcaccatc
atctacgtgacccacgaccaggaagaagccatgcgtctgtctcagcgcatcgcgattttc
agccacggcaagatcgttggattgggcagtggttttgacctttatcagaatccgccgaat
gctttcgttgcttcgtttctgggcaactccaacttcctcaaactcaaagctcagggtaat
gcggtggcttcgtttgaaggtcagcctctgtcgattcgcctgaccgcagggttgcagacc
gatcaggatgttttgctgatggtgcggccggagaaagcgttggccttgagcgtcgagcaa
gccgcccgggaacccttggcggcgggctggaatgaagtgtcggccacggtcgttgaagtg
ctgtttcttggcgaaagccagacttgcagtgtggtgacctcgggcggcacatcgatgacc
gtcaaggccctctctgccgccggtatgccgctcaaggctggcgacccggtgcgagtgcgc
tgggcgacggcggatgcgtgcgtgtacaccgaatgggcggaaagcgatctgaacaaggcc
gctggcgcgcattga
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