Pseudomonas frederiksbergensis: PFAS1_24470
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Entry
PFAS1_24470 CDS
T04786
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00250
Alanine, aspartate and glutamate metabolism
pfk00310
Lysine degradation
pfk00350
Tyrosine metabolism
pfk00650
Butanoate metabolism
pfk00760
Nicotinate and nicotinamide metabolism
pfk01100
Metabolic pathways
pfk01120
Microbial metabolism in diverse environments
Module
pfk_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PFAS1_24470 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PFAS1_24470 (gabD)
00310 Lysine degradation
PFAS1_24470 (gabD)
00350 Tyrosine metabolism
PFAS1_24470 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
PFAS1_24470 (gabD)
Enzymes [BR:
pfk01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
PFAS1_24470 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
PFAS1_24470 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
PFAS1_24470 (gabD)
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GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
APV42312
UniProt:
A0A1P8F1V6
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All DBs
Position
complement(5189090..5190565)
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AA seq
491 aa
AA seq
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MNPATSQLFRQQAYIDGQWLDAPDGACQDIFNPATGEKIGQVPNLGAAEARQAIAAANKA
WPTWRALTAKERSQTLKRWHALMIENADALAEILTLEQGKPLAEAKGEILYAASFIEWFA
EEAKRIYGDTIPSHKGDARIVVSKEPIGVVAAITPWNFPAAMITRKAGPALAAGCPCIVK
PAPETPFSALAMAALAEQAGIPPGIFNVITGDAVAIGGELTASPLVRKLSFTGSTAIGKL
LMAQCAPTLKKVSLELGGNAPFIVFDDADLERAVEGALIAKFRNAGQTCVCANRFLVQSG
IHDAFATRLAERVAQLNVGSGFEAGVTQGPLINERAVAKVEDHVQDALFQGARLLCGGER
HALGHGFFQPTVLAGVTGDMKVAQEETFGPLAAVFRFESEAEAVQLANDTEFGLAAYCYT
RDLGRAWRMSEALEYGMVGINEGLISTEVAPFGGIKSSGLGREGSKYGIEDYLELKYTLM
GGLDDFGSTPR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagcaacctcgcaactgttccgccagcaagcctacatcgacggccaatggctg
gatgcgcccgatggcgcctgtcaggacattttcaacccggccaccggcgaaaagatcggc
caggtgccgaaccttggcgccgcagaagctcgtcaagccatcgccgccgccaacaaagcc
tggccgacctggcgtgctctgaccgccaaggaacgtagccagacgctgaaacgctggcac
gcgctgatgattgaaaatgccgatgcgctggcagaaatcctcaccctcgaacaaggcaag
ccactggccgaagccaagggcgaaatcctctacgccgcgagtttcatcgagtggttcgcc
gaagaagccaagcgcatctacggcgacaccattcccagccacaaaggcgatgcacgcatt
gtggtcagcaaggaaccgatcggcgtggttgcggccatcaccccgtggaattttccggcg
gcgatgatcacccgcaaggccggcccggcgctggcagccggttgcccgtgcatcgtgaaa
ccggcaccggaaaccccgttttcggcgctggccatggccgcgttggcggaacaggccggg
atcccacccggcattttcaatgtgatcaccggcgacgccgtggccatcggtggcgagctg
accgccagcccgctggtgcgcaaactgtcgttcaccggttccaccgccataggcaagttg
ctgatggcgcagtgcgcgccaaccctgaaaaaagtctcactggaactgggaggcaacgcg
cccttcatcgtgttcgacgatgctgatctggagcgtgccgtagaaggtgcgctgatcgcc
aagtttcgcaatgccgggcaaacctgtgtctgtgccaatcgcttcctggtgcagagcggc
attcatgatgcttttgccacgcgactggccgagcgcgtggcgcaactgaacgtcggcagt
ggcttcgaggcaggtgtcactcaaggtccgctgattaacgaacgcgcggtggccaaagtc
gaagaccacgttcaggacgccctcttccaaggcgcccgactgctttgcggcggcgaacgc
catgcgctggggcacggcttcttccagccaaccgtgctggccggcgtgaccggtgacatg
aaagtcgctcaagaggaaacctttggcccgctggccgcggtgttccgcttcgagagcgaa
gccgaggctgtgcagttggccaacgacaccgagttcggccttgcggcttactgctacacc
cgcgatctggggcgcgcctggcgcatgagtgaagcgctggaatacggcatggtcgggatc
aacgaaggactgatttccactgaagtcgcgccctttggcgggatcaaatcctcgggtctc
ggtcgtgaaggatccaagtacggcatcgaagattatctggagctcaagtacaccttgatg
ggcgggcttgacgattttgggagcacaccgcgatga
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