Pseudomonas frederiksbergensis: PFAS1_24480
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Entry
PFAS1_24480 CDS
T04786
Name
(GenBank) carnitine dehydratase
KO
K23463
(Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-]
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PFAS1_24480
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Gene cluster
GFIT
Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
APV42314
LinkDB
All DBs
Position
complement(5191208..5192689)
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AA seq
493 aa
AA seq
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MTLARFQMCIGGEWVDALSGKTFESLNPALAQAWAELPDADEADVERAVQAAQTAFDSPA
WRGLTATARGKLLRRLGDLIAENKEQLAQLESRDNGKLIRETRGQVGYLPEFFHYTAGLA
DKLEGGTLPLDKPDLFAYTVHEAMGVVAAIIPWNSPLYLTAIKLAPALAAGNTIVIKPSE
HASATILELARLALEAGIPPGVVNVVTGYGPSTGAALTRHPLVRKIAFTGGAATARHVVR
SSAENFAKLSLELGGKSPNIIFADADLDSAINGAIAGIYAASGQSCVSGSRLLVQDEIYD
EFVDRLVERAKRIRIGNPQEDSSEMGPMATAQQLAVVEGLVADAIAEGARLRLGGKRPQN
LGDGWFYEPTLFECERNSMKIMQEEVFGPVASVIRFKDEAEALAIANDSQFGLAAGIWTR
DLGRAHRLARDVRSGIIWVNTYRAVSAMAPIGGFKNSGYGRESGIDSVLAYTELKTVWIN
LSQAPMPDPFVMR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacactcgcacgcttccagatgtgcatcggcggtgaatgggtcgatgccctctccggc
aagacttttgaaagtttgaaccccgccctggctcaagcctgggctgaattacccgatgcc
gacgaagccgatgtcgagcgcgccgtgcaggctgcgcagacggctttcgacagcccggcc
tggcgcggcctgaccgccaccgctcggggcaaactgctgcgccgtctcggcgacttgatc
gccgaaaacaaagaacaactggcgcagctggaaagtcgcgataacggcaagctgattcgc
gaaactcgcggtcaggtcggctacctgccggagttcttccactacaccgcgggcctggcc
gacaagctcgaaggcggcaccctgcccctcgacaagccggacctgtttgcctacaccgtg
cacgaagccatgggcgtggtcgccgcgatcattccctggaacagtccgctgtacctgacc
gcgatcaaactcgccccggccctggcggcgggcaacaccatcgtgatcaaaccgtcggag
cacgcctccgccaccattctcgaactggcccgtctggcgctggaagccggcatcccgccg
ggcgtggtcaacgtcgttaccggttacggcccaagcaccggcgccgccctcacccgccat
ccgctggtgcgcaaaatcgccttcaccggcggcgctgccacggcccggcatgtggtgcgt
agcagcgctgaaaacttcgccaagttgtctctggaactgggcggcaaatcaccaaacatt
atctttgccgatgccgacctcgacagcgcgatcaacggtgcgattgccgggatctatgcg
gcatcaggccagagctgcgtttccggctcgcggttgttggtgcaggacgaaatctacgat
gagttcgtcgatcgtctggtcgaacgtgccaagcgcatccgtatcggcaacccgcaggaa
gacagcagcgaaatgggcccgatggccaccgcacagcaactggctgtggtcgaaggcctg
gtcgccgatgccatcgccgaaggtgcgcgcctgcgcctgggtggcaagcgtccgcaaaat
ctgggcgatggctggttctacgagccgaccctgttcgaatgcgagcgcaactccatgaag
atcatgcaggaagaagtcttcggtccggtggcctcggtcatccgtttcaaagatgaagcc
gaagccctggcgattgccaacgactcgcagttcggcctcgccgccggtatctggactcgt
gatttgggccgcgcccatcgcctggcccgggacgtgcgctcggggattatctgggtcaat
acctaccgagccgtctcggccatggcgccgatcggcggcttcaagaacagcggctatgga
cgcgagagcggcatcgattcggtgctggcctataccgaactgaaaacggtgtggatcaac
ctctctcaggcacccatgcctgaccccttcgtgatgcgctag
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