Pseudomonas frederiksbergensis: PFAS1_24715
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Entry
PFAS1_24715 CDS
T04786
Name
(GenBank) AraC family transcriptional regulator
KO
K07506
AraC family transcriptional regulator
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_24715
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PFAS1_24715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding_2
Cupin_6
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
APV42355
LinkDB
All DBs
Position
complement(5246679..5247623)
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AA seq
314 aa
AA seq
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MEPPVHQPENEVLKPKDAQRITAESMPHHLPGTPQVYPRLPQMQDVMVQLFSHHSTVEPI
LVPAVVEPLLVLVLAGTALIEERSLGGEWKAVNVQAGDFFLTNTSEPYEMRWQTMGCDTF
EVMHLYLGLPLIDRAVRDLLGEHTNPVTFLEISGAQDERVNFMLDQLRFELIEERKPSLL
FVHSLAQALTVHLLRRYLDPHSTTRRSNALQAYKLRRVIDAMNERLADDFRLAHLAHIAD
LSEYHFSRMFKRATGLSPSQYFIRLRMSRARHLLLETNRSIIDVGLEVGYSSPGHFSQVF
RREVGVTPSAYRQA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcctgtgcaccagcccgaaaatgaagtcctgaaaccgaaggatgctcagcgc
atcacggccgaatcgatgccgcatcatctgccgggaacaccgcaggtatatccgcggctc
ccgcagatgcaggatgtgatggtgcagttgttcagccatcacagcaccgtcgagccgata
ctggtgcccgcggtggtcgagccgctgctggtattggtcctggcaggaacggccctgatc
gaggaacgctccctcggtggggaatggaaagcggtcaatgtgcaggctggcgacttcttt
ctcaccaacacaagcgagccttacgagatgcgttggcagactatggggtgcgacaccttc
gaagtgatgcatctgtatctcggccttccactgatcgatcgggctgtccgtgatcttctg
ggcgagcacaccaatccggtgaccttcctcgagatctccggtgcccaggatgagcgggta
aatttcatgcttgatcagttgcgcttcgagttgatcgaggagcgtaagcccagcctgttg
ttcgtacacagcctggctcaggcgctgaccgttcatctgttacgccgttatctcgatccg
cacagcactacccgacgcagcaacgcactacaagcctacaaactgcgccgcgtcatcgat
gccatgaacgagcgcctggccgatgacttccgccttgcccatttggctcatatcgccgat
ttgagcgagtatcacttcagcaggatgtttaaacgtgccacggggctgtcaccatcgcag
tacttcatccgcctgcgcatgagtcgcgcccggcatctactgcttgagaccaatcgcagc
attattgatgtcggattggaagtcggttattccagccccggccatttctcccaggttttt
cgtcgcgaggtgggggtcacgcccagcgcctaccgtcaagcgtga
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