Pseudomonas frederiksbergensis: PFAS1_25115
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Entry
PFAS1_25115 CDS
T04786
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfk02000
]
PFAS1_25115
Transporters [BR:
pfk02000
]
Other transporters
Pores ion channels [TC:
1
]
PFAS1_25115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
APV43252
LinkDB
All DBs
Position
5335528..5337654
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AA seq
708 aa
AA seq
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MRRTLVSICVLQAFSVSSWAEEATIDKASLELQATDIVGTADFETALGPVDGYRATRSAS
ATRTDTSIHETPQSITVVPKDVVEDISATRLQDALDYAGGVGRANNFGGQGLTTFTVRGF
TTGEFYRNGFPINRGYPNMPDANTIERLEVLRGPATMLYGRGDPGGTFNVISKQPLAVPV
VTLGSQLDDQGMKRGTLDASGPLDDEGRLAYRLNVVGEGGDTFRDHVETERYGVAPVLSW
QVTDETKVIFEGDFMRNNHPLDRGVTRYPNQIGTASRDTFFGEKDVGKLHNDNNMAQLRF
EHLLSDNWTLGGGFQWLDGTLEGNAVEANGVAADGRTLGRNFNYRKLEWTDKDTQLNLTG
HFTAGGFDHTLLTGVEFEDYDYKSIIQRSSGAVSAYPIDIFNPVYGQPRPALTRTPTNDQ
ENLKTYAAFLQDQVALTERLKLLAGARFERFEHDYETFVPGGKSWEASDNAVTPRIGLTY
DLTDTVAIYANTARSFKPNTGASRQGGGFEPEKGKSYELGFKWEALDSQLSVDAAIYQIE
KRNVLTTDPVDSTFSVAAGEVRSRGFDLNVAGNLTPQWRVIGGYAYVDAEVTKDNVIKSG
TRLMNIPQNSFSLLNVYEFQDGVFKGLGLGTGLKYVDEREGQTANTAFSMGSYTVVDLLS
YYKVNERIRINLDVKNLTDEDYEEGAFGNVYAYPGAPRTVQVGISYTL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgtactctggtttctatctgtgtgcttcaggcgttttccgtttcttcctgggct
gaggaagcgacaatcgataaagccagcctggagctgcaagcgaccgacatcgttggcact
gctgattttgaaacggccttggggccggtggatgggtatcgtgcgacgcgttcggccagt
gcgacgcgtaccgacacgtcgatccacgaaacaccacaatccataactgtggtgcccaag
gatgtggtagaggacatcagtgccacccggctgcaggacgcgctcgactatgccggcggc
gtcgggcgggccaacaacttcggtggccagggtttgactactttcacggtgcgtggattt
accaccggcgagttctaccgcaacggctttccgatcaaccgtggttatccgaacatgccg
gatgcgaacaccatcgagcggcttgaagtgttgcgagggccggcgaccatgctctatggc
cgaggcgacccaggtggcacattcaacgtcatttccaaacaacccctggccgtgcccgtt
gtgaccttgggtagccaactcgatgaccagggaatgaagcgtggcacgctggacgcctcc
ggcccgctggatgatgaaggccgcctggcctatcgcctgaatgtggtaggtgagggcggc
gataccttccgtgatcatgttgaaaccgagcgctacggcgtagcgccggtactaagctgg
caggtcaccgatgagaccaaagtgatcttcgaaggtgatttcatgcgcaacaaccacccg
cttgatcgcggcgtgacgcgctatccgaatcagattggcaccgcgtctcgcgataccttc
ttcggcgaaaaagacgttggcaagttgcacaacgacaacaacatggcgcagctgcgtttc
gagcacctgctaagcgataactggacgttgggtggtggtttccaatggctcgatggcact
cttgaaggcaatgccgttgaggccaatggtgtcgcggccgacggtcgcaccttgggccgc
aactttaactaccgcaagctggaatggacggataaagacactcagctcaacctcaccgga
catttcacggcgggcggttttgatcacaccttgctgaccggtgtcgaattcgaagactac
gactacaagtcgatcattcagcgctccagcggcgcggtgagtgcgtacccgattgatatc
ttcaatccggtgtatggccagcctcgaccagccttgacccgaaccccgaccaacgatcaa
gaaaacctcaagacctacgccgctttcctccaggatcaagtggcattgaccgagcgcttg
aaactcctggccggtgcccgcttcgagcgcttcgaacatgactacgaaacctttgtaccg
ggcggtaaaagctgggaagccagcgacaatgccgtgaccccgcgcatagggctgacctac
gatctcaccgacaccgtggcgatctatgccaatacggctcgctcgttcaagcccaacacg
ggtgccagtcgtcaaggcggtggtttcgaaccggaaaaaggcaaatcctatgagttgggt
ttcaagtgggaagcgctggacagtcaattgagtgtcgacgcggcgatctaccagattgaa
aagcgcaacgtactcaccaccgatcctgtggactctaccttcagtgtggcggcaggcgag
gtgcgcagccgtggtttcgacctgaacgttgccggcaacctgactccgcaatggcgggtg
attggcggttacgcctatgtcgatgcggaagtgaccaaggacaacgtcatcaagtccggc
acccgactgatgaacattccgcagaacagcttcagcctgctcaacgtctacgagttccag
gatggcgtatttaagggcttgggtctgggcacaggtctgaagtacgtagatgagcgcgaa
gggcagacagccaacacagcattttcaatgggcagctacaccgtcgtcgacctactcagc
tattacaaggtcaacgaaaggatcaggatcaacctggatgtgaaaaatctaactgacgaa
gactatgaggaaggagcgtttggtaacgtttacgcctatccaggggccccaagaacggta
caggtcggcatttcatacacgttgtaa
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