Pseudomonas frederiksbergensis: PFAS1_25560
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Entry
PFAS1_25560 CDS
T04786
Name
(GenBank) DNA-binding protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_25560
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PFAS1_25560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
APV42510
LinkDB
All DBs
Position
complement(5438583..5440016)
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AA seq
477 aa
AA seq
DB search
MELHVVINGRKDLAGQLYNQLRSAIESGRLAAGTQLPPSRLLAEQLGISRKTISDTYTQL
TYENFLTGVIGKGTYVNARPAKITRKQSHSELASAEVIESWRNLPVFLRHPTLEGSLRYD
FIGGATSKGQFPQDDWRRCTAHALRQIAASKGFYSLPEGLPALRNAIARHIAFSRGVNCQ
DEDVVVCNGAQQALDLISRVLTRPGSIVAMEDPGYPPARLLFGTHGATVIGVPVDAEGIQ
VDKIPLGTRLIYVTPSHQFPLGMPMSQARRVALLERAHELGAIIIEDDYDSEFRYEGRPT
DSLQSMDERGIVAYVGTFSKTLLPELRLGYAILPPAILDAVIRAKQLTDLHTSTLPQWAL
AKFIAEGCLLKHIRRCHTIYAGRRERILERMAGDLSPWLEAVPTTAGFHMVVMCKVSIDI
PLVITLAKKVEVGVYPIDSFFYQQAPQAGLFLGFGAIETLDIDIALDRLRDILQQVA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcacgttgtcatcaacggccgcaaggacctggcaggccagttgtacaaccaa
ctgcgcagcgccatcgaatccggtcgtctggcagccgggacgcagctgccgcccagccgt
ttgctggcagaacaactgggcatttcgcgcaagaccatttccgatacctacacgcaactg
acctacgaaaacttcctcaccggggtcatcggcaaaggcacctacgtcaacgcccgaccg
gcaaaaatcacccgcaaacagagccattcggagctggccagtgccgaggtcatcgagtcc
tggcgcaacctgccggtgttcctgcgccatccgacgctggaaggctctttgcgctacgac
ttcatcggcggcgccaccagcaagggccagtttcctcaggatgactggcggcgctgcacc
gctcacgccttgcgccagatcgccgcgtccaagggcttctacagcctgcccgaaggcctg
ccggcgctgcgcaatgcgattgcccggcacatcgcgttttctcgcggggtcaattgtcag
gacgaagacgtggtggtgtgcaatggcgcgcaacaggcgctggacctgatttcccgggtg
ctcacgcgtcccggcagcatcgtcgccatggaagaccccggttatccgcccgctcgcctg
ttgttcgggacccacggtgccacggtgatcggcgtcccggtggatgcggaaggcattcag
gtggacaaaatccccctcggcacccgcctgatctacgtcacgccgtcgcaccagtttccg
ctcggcatgccgatgagccaggcccgccgggtggcgctgctggaacgagcccatgagttg
ggcgcgatcatcatcgaggacgattacgacagcgagttccgctacgaaggccggcccacc
gactcgctgcaaagcatggacgaacgcggcatcgtcgcctacgtcgggaccttttcgaaa
accttgctgccggagctgcgcctgggttacgcgatcctgccgccagcgattctcgacgcg
gtcattcgcgccaagcagcttaccgacctgcacacctccaccctgccccaatgggcgctg
gccaagttcatcgccgaaggctgtctgctcaagcacatccggcgctgccatacgatctat
gccgggcgtcgtgagcggatcctcgagcgcatggccggcgatttgtcgccgtggctcgag
gcggtgccgactactgccgggttccacatggtggttatgtgcaaagtgtctatcgatatt
ccgttggtgatcacacttgcaaaaaaagtcgaagtcggggtgtatcccatcgacagcttt
ttctatcagcaagcgccgcaggccgggcttttcctcggttttggcgccatcgaaaccctc
gacatcgacatcgccctggaccgcctgcgggacattttgcagcaggttgcctga
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