Pseudomonas frederiksbergensis: PFAS1_26265
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Entry
PFAS1_26265 CDS
T04786
Name
(GenBank) L-seryl-tRNA(Sec) selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00450
Selenocompound metabolism
pfk00970
Aminoacyl-tRNA biosynthesis
pfk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PFAS1_26265
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFAS1_26265
Enzymes [BR:
pfk01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
PFAS1_26265
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Motif
Pfam:
SelA
Se-cys_synth_N
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
APV42640
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Position
complement(5614018..5615442)
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AA seq
474 aa
AA seq
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MSSRSASSTLRLPSIDSLLRHRACQPLAERYGRDALLASLRQLLDDLREPVLSGQLDAIE
IAPEALAGRAGERLAFQHRSNVRRVFNLTGTVLHTNLGRALLPEEAIEAVQRAARYPLNL
EFDLNSGQRGDRDDLIEGLIRELTGAEAVTVVNNNAAAVLLALNSLGARKEGIISRGELI
EIGGAFRIPDIMARAGVRLHEVGTTNRTHARDYEAAIGPRSGLLMRVHASNYNIEGFTAR
VPTAELALLAHQHGLPLLEDLGSGSLLDLTRWGLPAEPTVRQALSDGADIVTFSGDKLLG
GPQAGLIVGRKDLIAKIKKNPLKRALRVDKLTLAALEAVLGLYRDPERLAERLPSLRLLT
RPQADILAQAERLQPSLAKILGDDWSVSAVLALGMIGSGSQPVARLPSAALCLRPHVSKR
LRGRQLHGLEAALRALPIPVIGRIDDDALWLDLRQLDDEPAWLAQLDQIAGTLA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccagatccgccagctcaaccctgcggctgccttcaatcgacagcttgctgcgt
catcgcgcctgtcagccattggccgagcgttacgggcgtgacgccctgctggccagcctg
cggcaattgctcgatgacttgcgtgaaccggtgctttcagggcaactcgacgccattgaa
atcgcgcctgaagcgttggcgggcagggcgggtgaacgcttggcctttcagcatcgcagc
aatgtgcgccgggtgttcaacctcaccggcacggtgctgcacaccaatctggggcgagcg
ttgttgccggaggaagccatcgaagcggtgcaaagggcggcccgctatccgcttaacctg
gaattcgatctaaacagcggccagcgcggcgaccgtgatgacctgatcgaaggcttgatc
cgcgagctgaccggcgccgaggcggtgacggtggtcaacaacaacgccgctgcggtgttg
ctggcgctcaacagtctgggcgcgcgcaaggaaggcatcatttcccggggcgaattgatc
gaaatcggtggcgccttccgcattcccgacatcatggccagggccggggtcaggctccac
gaagtcggcaccaccaatcgcactcatgcccgggattacgaggcggccattggcccacgt
agcggtttgctgatgcgcgtccatgcgagcaactacaacatcgaaggcttcaccgcgcgg
gtgccgaccgccgagttggcgctactcgcgcatcaacacggtttgccattgcttgaagac
ctcggcagcggcagcctgctggacctgacgcgctggggcttgcccgccgaaccaacggtg
cgccaggcgctgagcgatggcgctgacatcgtcaccttcagtggcgacaaactattgggt
ggcccacaggccgggttgattgtcggccgcaaagacctgatcgcgaagatcaagaagaac
ccactcaaacgcgccttgcgggtcgacaaactgaccctcgctgccctcgaagcggtgttg
ggcttgtaccgcgaccctgaacgtctggctgagcggctgccgagtttgcgcctgttgacc
cgaccgcaggcggacatcctcgcccaggctgagcgcctgcaaccctcgctggctaaaatc
ctgggcgatgactggagcgtcagcgcagtactggcgttggggatgatcggcagcggcagc
caaccggtggcgcgattgcccagtgccgcgttatgcctgcgaccgcacgtctccaaacgt
cttcgtggacggcagctgcatggcctggaagctgccctgcgagcgttgccgattccggta
atcgggcgcattgatgacgatgcgttgtggctggacctgcggcaactggacgatgagcca
gcgtggctggcgcaactcgatcagattgcaggcaccctagcgtga
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