KEGG   Pseudomonas frederiksbergensis: PFAS1_26375
Entry
PFAS1_26375       CDS       T04786                                 
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
  KO
K12685  subtilase-type serine protease [EC:3.4.21.-]
Organism
pfk  Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pfk02000]
    PFAS1_26375
   02044 Secretion system [BR:pfk02044]
    PFAS1_26375
Transporters [BR:pfk02000]
 Other transporters
  Pores ion channels [TC:1]
   PFAS1_26375
Secretion system [BR:pfk02044]
 Type V secretion system
  Autotransporter-1 (AT-1) family
   PFAS1_26375
SSDB
Motif
Pfam: Autotransporter Peptidase_S8 PATR VacA_C
Other DBs
NCBI-ProteinID: APV42660
LinkDB
Position
complement(5642421..5645378)
AA seq 985 aa
MDVQIKPMSVGTLLLLVSAMPVSVQAAYLETGTPGDAASWRSAEFQRDWGLARMQADQAY
AAGITGKGVKIGELDSGFDAAHPEFATDRYHGVTASGSYVDGSPFNVVGTLNANNDSHGT
HVAGTIGASRDGTGMHGVAYNAQVYVGNTNKNDSFLFGPNPDPRYFKAVYNALADAGVRA
INNSWGSQPPDVSYRTLADLQAAYAQHWNKGTWLDEAADVSRRGVINVFSAGNSGYPNAS
VRSALPYFEPDLEGHWLAVSGLDQGNQQKYNQCGIAKYWCITTPGAKIDSTIPGAGYAIK
SGTSMSAPHATGALALVMERYPYMNNQQALETLLTTATQLDGSITEAPSTRIGWGVANLE
LAMHGPGQLLGRFDANLGAGQSDVWSNDITDKALIQRQSEDAAEHSAWQQTLKTKGWENG
VPLGASQQDQTDYAVGTARDLAAATRVYEGSLIKSGVGRLMLTGNSTYRGPTTVNGGLLS
VNGSLASPVTVNDSGTLGGSGRVGALTANRGATVAPGNSIGTLQVSGAVTFAPGSTYAVE
LSPTDSDRIVAGGTATVSGATVSLSLENSPDLLSTQQVQSLLGHQYNILQAAGGIQGQFG
AVLPNYLFIGGSLDYAATGIQLSVERNDTTFASVGQTPNQRAVASAVEGLGAGNPVYESL
LLSPTATSAQQAFQQLSGEIYPALGSVLINDSRYLRDAVGERLIDAQGTQSNGWIKALGA
WGKTDERHDTAGYTTSIGGLLAGVDGALDEQTRIGLVTGYSDSSVSMGSGTHSSAKVDSY
HLGAYAGRELGAWRLSAGGAYSWHRADVKRDLQYGDVSAKQKAKVNAGTTQVFGEAAYRL
NLQPLALEPFANLAYVHLDTEGFTEKGDAAALKSSGDTRDAVLSTLGVRALKTVNLSGQQ
KLDLSGSLGWQHNLSPTDSEEHLAFAGGSTAFSVESSPMMRDAALVGAHASLALSRDIRL
NLDYTGQLASREKSHGVGLSLNWQF
NT seq 2958 nt   +upstreamnt  +downstreamnt
atggatgtacagatcaagccgatgtcggtcggcacgctattactcctggtgtcggcaatg
cccgtctcggtgcaagccgcttatctggaaaccggcacgcctggcgatgccgccagttgg
cgctcggcggagttccagcgcgactggggactcgcccgcatgcaagccgatcaagcctat
gccgccggcatcaccggtaaaggcgtgaaaatcggcgagctcgattctggcttcgatgca
gcccatcccgaattcgccaccgaccgttaccacggggtgacagccagcggcagttacgtt
gatggctccccgttcaatgtcgtcggcacactcaacgccaacaacgactcccatggcaca
catgtcgccggcactatcggtgcctcgcgcgacggcaccggcatgcacggcgtggcctac
aacgcgcaggtttacgtcggcaacaccaacaagaacgacagcttcctgttcggccccaac
cctgatccacgctacttcaaagcggtctataacgcgttggcggatgccggtgtgcgagcg
atcaacaacagctggggcagccaacccccggatgtcagctatcggaccctcgccgatctg
caggcggcctacgcccagcactggaacaaaggcacctggctcgatgaagccgcagacgtt
tcccggcgcggcgtgatcaacgtgttcagcgccggtaatagcggttaccccaacgccagc
gtgcgttcggccttgccgtatttcgagccggacctggaaggccactggctggccgtgtcg
gggctggatcaaggcaaccaacagaaatacaaccagtgtgggatcgccaagtattggtgc
atcaccacccccggcgcgaagatcgacagcaccattcccggcgcaggctatgcgatcaag
tccggcacttccatgtccgcgccgcatgccaccggtgccctggcgctggtgatggaacgc
tatccgtacatgaacaaccagcaggcgctggaaacgctgctgaccaccgccacccaactc
gacggctcgatcaccgaggcgccgagtacccgcatcggctggggcgtcgccaacctcgaa
ctggcgatgcacgggccgggccaattgctcggacgtttcgacgccaatctgggggcaggg
cagagcgatgtctggagcaacgacatcaccgacaaggcgctgattcagcgtcaaagcgaa
gacgcagcggagcacagtgcctggcaacagacactgaagaccaaaggttgggagaacggt
gtaccgctcggtgccagccagcaggatcagaccgactatgcggtgggcacggcccgtgat
ctcgccgccgccactcgggtctacgaaggcagcctgatcaagtctggtgtcgggcgcctg
atgctcaccggcaacagcacttatcgcgggccgaccacggtgaatggcggcctgctgtcg
gttaacggttcgctggcatcgccagtgaccgtcaatgacagcggcacgttgggcggatcg
gggcgcgttggcgcactgacggccaaccgcggcgctacggttgcgccgggcaattccatt
ggcaccttgcaggtcagcggtgccgtcacgtttgcgccgggttcgacctacgcggtggag
ctatcgccgaccgatagcgaccggatcgtcgcgggcggcacggccacggtcagcggcgcg
accgtcagcctgtcactggaaaacagcccggacttgctcagcactcaacaagtgcaaagc
ctgctcggtcatcagtacaacatcctgcaagcggccggtggcattcaaggtcagttcggc
gcggtgctgcccaactacctgttcatcggtggcagcctcgattacgccgccaccggcatt
caattgagtgtcgagcgcaacgacacgaccttcgccagcgtcggccaaacgcccaaccag
cgcgccgtagcttctgccgtcgaagggctgggggcgggcaatccggtttacgaaagcctg
ctgctgtcgcccaccgcgacgtccgcccaacaggcgtttcagcagttgtcgggggaaatc
tatccggcactgggttcggtactgatcaacgacagccgctacctgcgcgatgctgtcggt
gagcggttgattgacgcccaaggcactcaaagcaatggctggatcaaggcgctgggcgcc
tggggcaaaaccgatgagcgccatgacaccgccggttacaccacttcgattggcggcttg
ctggccggtgtcgacggggcgctcgatgagcaaacccggatcggcctggtcaccggttac
agcgacagctcggtgagcatgggctccggcactcattcatcggccaaagtcgatagctat
cacctgggtgcttatgccggccgcgagctgggtgcctggcgcctgagtgccggcggcgcc
tacagctggcatcgggccgacgtcaaacgtgacctgcaatacggcgacgtcagcgccaaa
cagaaagccaaggtcaatgccggaaccacccaagtgtttggtgaagcggcatatcgcctg
aacctgcaaccgctggcgctcgaacccttcgcgaacctggcctacgtgcacctcgacacc
gaaggtttcaccgagaaaggtgacgctgcggcactgaaaagcagtggcgacacgcgtgac
gcggtgctcagcacgttgggcgtgcgtgcattgaaaaccgtgaatttgtccggccagcag
aagttggacctgagcggcagtctcggctggcagcacaacctgagccctactgattctgaa
gaacacctggcatttgccggcggcagcacagcgttttccgtggagagttcgccgatgatg
cgtgatgcggcgctggtgggtgcccatgccagcctggccttgagccgggacattcgcttg
aacctcgattacaccggccaactggccagtcgcgagaaaagccatggcgtaggcctgagc
ctcaattggcagttttaa

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