Pseudomonas frederiksbergensis: PFAS1_26490
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Entry
PFAS1_26490 CDS
T04786
Name
(GenBank) circadian clock protein KaiC
KO
K08482
circadian clock protein KaiC
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
PFAS1_26490
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rad51
RecA
DnaB_C
PAXNEB
nSTAND3
AAA_5
IstB_IS21
AAA_16
SLFN-g3_helicase
MEDS
CbiA
AAA_22
AAA_24
NPHP3_N
PhoH
AAA_7
DEAD
AAA_11
AAA_19
AAA
AAA_30
ResIII
GvpD_P-loop
NACHT
Mg_chelatase
Nop5_56-rel_N_Arc
TsaE
Motif
Other DBs
NCBI-ProteinID:
APV42683
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Position
5676083..5677585
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AA seq
500 aa
AA seq
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MSTSNELISAKAATGIEGLDDILAGGLSRGHVFLLEGEPGTGKTTVALHFLLAGARAGER
SLYITLSETERELRQGALSHGWELDENIHIFELTPPESLLNAEHQQSLLYSSDLELGEAT
KQIFEVVERVKPTRVVLDSLSEIRLLAQSSLRYRRQILAIKHYFVRYDATVVLLDDLTTE
SLDKTVHSVAHGVIRLEELTPNYGAERRRIRVVKYRGQKYRGGFHDFTIMGDGVHVFPRL
VAAEHRGRYIRQQLSSGIKEMDALLGGGIETGSSTLILGPAGTGKSLISMIFAAAAVARG
EKAALFIFDEELGLLFERMKNIGIDLKALQDTGNLLIEQVDAAELSPGEFSYRVRRCVDD
GDIKTVVIDSINGYQAAMPEENALVLHMHELLLYLNRQGAATFMTVAQHGLVGDMQAPVD
ITYLADTVILLRYFEALGKVRRAISIIKKRTGSHESTIREYRISAQGMTIGEPLDAFQGV
LRGVPTYLGASNPLLEEQSP
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttgtctacatcaaacgagttgatcagtgcaaaagccgccaccggcatcgaaggtctggat
gacatcctggccggtggtttgtcccgcggccatgtgtttttactggagggtgaacccgga
accggcaaaaccaccgtcgctttgcatttcctgttggccggcgctcgtgccggcgaacgc
tcgttgtacatcaccctgtccgagaccgaacgcgaattgcgccaaggggccttgtcccat
ggttgggagctggatgagaacatccacatcttcgagctgacgcccccggaaagcctgctc
aatgccgaacatcagcaaagcctgctgtattcctcggaccttgaactgggcgaagccacc
aagcagatttttgaagtggtcgaacgggtcaagccgactcgtgtggtgctcgacagcctt
tccgagatccgtttgctggcccagagttctttgcgctaccgtcgccagatcctcgcgatc
aaacactacttcgtgcgttatgacgccacggtggtgttgctggacgacctgaccaccgaa
tccctcgataaaaccgtgcacagtgtggcccacggggtgattcgccttgaggaactgacc
cccaactatggcgccgagcgtcggcgaatccgcgtggtgaagtaccgtggccagaagtac
cgtggcgggtttcatgacttcaccatcatgggcgatggcgttcatgtgtttccgcgcctg
gtggccgctgagcatcgcggtcgctatatccgtcagcaactgtccagcggcatcaaggaa
atggatgccttgctcggtggcgggatcgagaccgggtccagcacattgatcctcggccct
gccgggaccggcaaatcactgatctcgatgatcttcgccgctgccgccgtggcccgtggc
gaaaaagccgcgctgttcattttcgatgaagagctcgggttgctgttcgagcgcatgaag
aacatcggcatcgacctcaaggcgctgcaagacaccggcaacctgctgatcgagcaggtg
gacgcggccgagttgtcccccggagagttttcctaccgggttcgtcgctgcgtcgatgac
ggcgatatcaagacggtcgtgatcgacagcatcaacggctatcaggcagcgatgcccgag
gaaaacgcgttggtactgcacatgcacgagttgctgctgtacctcaatcgccagggtgcc
gcgaccttcatgaccgtcgcccagcatgggctggtcggcgacatgcaggcccccgtggac
atcacctatctggccgacacggtcatcctgctgcgctacttcgaggcactgggcaaggtg
cgccgggcgatttcaatcatcaagaaacgtacgggcagccatgaatcgaccattcgtgaa
taccgcatcagcgctcaaggcatgaccattggtgaaccactggatgcctttcagggagtg
ctgcgcggtgtcccgacctatctgggtgccagcaatcccctgcttgaggaacaaagcccg
tga
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