KEGG   Pseudomonas frederiksbergensis: PFAS1_26490
Entry
PFAS1_26490       CDS       T04786                                 
Name
(GenBank) circadian clock protein KaiC
  KO
K08482  circadian clock protein KaiC
Organism
pfk  Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:pfk00001]
 09190 Not Included in Pathway or Brite
  09193 Unclassified: signaling and cellular processes
   99995 Signaling proteins
    PFAS1_26490
SSDB
Motif
Pfam: ATPase AAA_25 Rad51 RecA DnaB_C PAXNEB nSTAND3 AAA_5 IstB_IS21 AAA_16 SLFN-g3_helicase MEDS CbiA AAA_22 AAA_24 NPHP3_N PhoH AAA_7 DEAD AAA_11 AAA_19 AAA AAA_30 ResIII GvpD_P-loop NACHT Mg_chelatase Nop5_56-rel_N_Arc TsaE
Other DBs
NCBI-ProteinID: APV42683
LinkDB
Position
5676083..5677585
AA seq 500 aa
MSTSNELISAKAATGIEGLDDILAGGLSRGHVFLLEGEPGTGKTTVALHFLLAGARAGER
SLYITLSETERELRQGALSHGWELDENIHIFELTPPESLLNAEHQQSLLYSSDLELGEAT
KQIFEVVERVKPTRVVLDSLSEIRLLAQSSLRYRRQILAIKHYFVRYDATVVLLDDLTTE
SLDKTVHSVAHGVIRLEELTPNYGAERRRIRVVKYRGQKYRGGFHDFTIMGDGVHVFPRL
VAAEHRGRYIRQQLSSGIKEMDALLGGGIETGSSTLILGPAGTGKSLISMIFAAAAVARG
EKAALFIFDEELGLLFERMKNIGIDLKALQDTGNLLIEQVDAAELSPGEFSYRVRRCVDD
GDIKTVVIDSINGYQAAMPEENALVLHMHELLLYLNRQGAATFMTVAQHGLVGDMQAPVD
ITYLADTVILLRYFEALGKVRRAISIIKKRTGSHESTIREYRISAQGMTIGEPLDAFQGV
LRGVPTYLGASNPLLEEQSP
NT seq 1503 nt   +upstreamnt  +downstreamnt
ttgtctacatcaaacgagttgatcagtgcaaaagccgccaccggcatcgaaggtctggat
gacatcctggccggtggtttgtcccgcggccatgtgtttttactggagggtgaacccgga
accggcaaaaccaccgtcgctttgcatttcctgttggccggcgctcgtgccggcgaacgc
tcgttgtacatcaccctgtccgagaccgaacgcgaattgcgccaaggggccttgtcccat
ggttgggagctggatgagaacatccacatcttcgagctgacgcccccggaaagcctgctc
aatgccgaacatcagcaaagcctgctgtattcctcggaccttgaactgggcgaagccacc
aagcagatttttgaagtggtcgaacgggtcaagccgactcgtgtggtgctcgacagcctt
tccgagatccgtttgctggcccagagttctttgcgctaccgtcgccagatcctcgcgatc
aaacactacttcgtgcgttatgacgccacggtggtgttgctggacgacctgaccaccgaa
tccctcgataaaaccgtgcacagtgtggcccacggggtgattcgccttgaggaactgacc
cccaactatggcgccgagcgtcggcgaatccgcgtggtgaagtaccgtggccagaagtac
cgtggcgggtttcatgacttcaccatcatgggcgatggcgttcatgtgtttccgcgcctg
gtggccgctgagcatcgcggtcgctatatccgtcagcaactgtccagcggcatcaaggaa
atggatgccttgctcggtggcgggatcgagaccgggtccagcacattgatcctcggccct
gccgggaccggcaaatcactgatctcgatgatcttcgccgctgccgccgtggcccgtggc
gaaaaagccgcgctgttcattttcgatgaagagctcgggttgctgttcgagcgcatgaag
aacatcggcatcgacctcaaggcgctgcaagacaccggcaacctgctgatcgagcaggtg
gacgcggccgagttgtcccccggagagttttcctaccgggttcgtcgctgcgtcgatgac
ggcgatatcaagacggtcgtgatcgacagcatcaacggctatcaggcagcgatgcccgag
gaaaacgcgttggtactgcacatgcacgagttgctgctgtacctcaatcgccagggtgcc
gcgaccttcatgaccgtcgcccagcatgggctggtcggcgacatgcaggcccccgtggac
atcacctatctggccgacacggtcatcctgctgcgctacttcgaggcactgggcaaggtg
cgccgggcgatttcaatcatcaagaaacgtacgggcagccatgaatcgaccattcgtgaa
taccgcatcagcgctcaaggcatgaccattggtgaaccactggatgcctttcagggagtg
ctgcgcggtgtcccgacctatctgggtgccagcaatcccctgcttgaggaacaaagcccg
tga

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