Pseudomonas frederiksbergensis: PFAS1_26645
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Entry
PFAS1_26645 CDS
T04786
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PFAS1_26645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfk03400
]
PFAS1_26645
DNA repair and recombination proteins [BR:
pfk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PFAS1_26645
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
KH_GLD-3_2nd
Motif
Other DBs
NCBI-ProteinID:
APV42711
LinkDB
All DBs
Position
5713705..5714565
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AA seq
286 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVALVSATSSQGIDFDWLDSRSMDPVGYKRINKVTGKEVTKEH
IVKGVQYEKGQYVVLSEEEIKSAHPLSTQTIDIFSFVDSEQIPLQNIDTPYYLAPDKRGG
KVYALLRETLSQTNKVALAHVVLHTRQHLAALMPLESAMVLVMLRWPAEVRSLDTLELGS
EVTKPQLAKGELEMAKRLVEDMSADWSPEDYRDSFEDKIMALVEKKANEGKIEAVETATG
EDERKTADVIDLTELLKRSLGGKSTGKTKPAAKPAVNKKATKTSRG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggcaatctggaaaggcgcgatcagtttcggtctggtgcatatccctgtggca
ctggtctcggcgacgtcctcgcaagggatcgacttcgattggctcgacagccgcagcatg
gacccggtgggctacaagcgcatcaacaaggtcaccggcaaggaagtgaccaaggaacat
atcgttaaaggtgtgcagtatgaaaagggccagtatgtggtcctcagcgaagaggaaatc
aagtcggcgcacccgctgtccacgcagaccatcgacatcttttcttttgtcgacagcgag
cagatccccctgcaaaacattgatacgccctactacctcgcgccggacaaacgcggtggc
aaggtctatgcgctgttgcgcgaaacgttaagccaaaccaataaagtcgccctggctcat
gttgtgctgcacacgcgccagcaccttgcggctttgatgccgctggagtcggcgatggta
ttggtgatgctgcgctggcctgccgaagtgcgaagcctggatacgcttgagttgggcagt
gaagtcaccaagccccaactggccaagggtgagctagagatggccaaacgactggtcgag
gacatgagcgcagactggagccccgaggattatcgcgacagttttgaagacaagatcatg
gccctggtggagaaaaaggccaacgaaggaaaaatcgaagctgtcgaaacggcgactggc
gaagatgagcgtaaaaccgccgatgttatcgatctgaccgagctgcttaaacgcagcctg
ggtggcaagagcacgggcaaaacgaagcccgccgcgaaacccgccgtaaacaaaaaagcc
acgaagacttctcgtggctga
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