Pseudomonas frederiksbergensis: PFAS1_27030
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Entry
PFAS1_27030 CDS
T04786
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
pfk
Pseudomonas frederiksbergensis
Pathway
pfk00330
Arginine and proline metabolism
pfk01100
Metabolic pathways
pfk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PFAS1_27030
Enzymes [BR:
pfk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
PFAS1_27030
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
APV42785
LinkDB
All DBs
Position
complement(5797966..5800221)
Genome browser
AA seq
751 aa
AA seq
DB search
MYKDLKFPVLIVHRDIKADTVAGDRVRGIARELEQEGFSIVSAVNYTEGRLVASTHHGLS
CMLIAAEEASTHSHLLHNMAELIGLARVRAPDLPIFALGEQVTLENAPADAMAELNQLRG
ILYLFEDTVPFLARQVARAARKYLDGLLPPFFKALVQHTADSNYSWHTPGHGGGVAYHKS
PVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS
TANKIVWHSMVARDDLVLVDRNCHKSILHSIIMTGAIPLYLCPERNELGIIGPIPLSEFS
RESIQAKIDASPLTKGRAPKVKLAVVTNSTYDGLCYNAELIKQQLGNSVEVLHFDEAWYA
YAAFHEFFAGRYGMGTSRSEGGPLVFTTHSTHKLLAAFSQASMIHVQDGGARQLDRDRFN
EAFMMHISTSPQYSIIASLDVASAMMEGPAGRSLLQEMFDEALSFRRALANLRQHIAADD
WWFSIWQPPSVEGIDRVITDDWLLQPDADWHGFGGVTDDYVLLDPIKVTLVMPGLTAGGA
LSQRGIPAAVVSKFLWERGLVVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRSYDAN
VSLATCLPCVAQEDVARYQGMGLRDLCDQLHACYRSNATAKHLKRMYTVLPEIAMKPSDA
YDQLVRGEVEAVSIDALDGRIAAVMLVPYPPGIPLIMPGERFTESTRSIIDYLAFARTFD
SSFPGFVADVHGLQHEDEGNGRLYTVDCIKE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagatttgaaattcccggtcctgatcgtccatcgcgacatcaaggccgacacc
gtggccggtgatcgcgtgcgtggcatcgcccgggagctggagcaggaaggcttcagcatt
gtctcggcggtgaattacaccgaagggcgactggtcgcttcgacccatcacggtctttcc
tgcatgttgattgcggccgaagaagccagcacccactctcatctattacacaacatggcc
gagctgattggcctggcgcgggtgcgtgcgcccgacttgccgatcttcgcgctgggcgag
caggtgaccctggagaacgctccggccgacgccatggccgaactcaatcaactgcgcggg
attctttatcttttcgaagacaccgtgccttttctggccagacaggtcgctcgagcggca
cgcaaatatctggatggtttgctgccgccgtttttcaaagcgctggtgcagcatacggcc
gactccaattattcctggcacacacccggccatggcggcggcgtggcgtaccacaagagc
ccggtgggtcaggcgtttcaccagttcttcggggaaaataccctgcgctccgatttgtcg
gtatcggtgccggaactcggttctttgctcgatcacactggcccgctggcggaagccgag
gctcgtgctgcccgcaatttcggcgccgatcacaccttcttcgtgatcaatggcacctcg
accgccaacaagattgtctggcattcgatggtcgctcgcgatgacttggtgttggtggac
cgcaactgccacaagtcgatattgcactcgatcatcatgaccggcgccattccgctgtac
ctgtgcccggagcgcaatgagctgggaattatcggcccgattcccttgagcgaattcagc
cgcgaatcgattcaggccaagatcgacgccagcccgctgaccaagggccgggcgcccaag
gtcaagttggcggtggtgaccaattcgacgtacgacggcctctgctacaacgctgagctg
atcaagcagcagttgggtaacagcgtcgaggtcttgcacttcgatgaggcctggtacgcc
tacgcggcgtttcatgagtttttcgccgggcgttacggcatgggcacttcccgcagtgaa
ggcggccccttggtgttcaccacccattccacccacaaactgctggcggcgttcagccag
gcgtcgatgattcacgttcaggatggcggcgcgcggcaactggatcgggatcgcttcaat
gaagcgttcatgatgcacatctcgacctcgccgcagtacagcatcatcgcctcgctggat
gtggcgtcggccatgatggaaggcccggccgggcgatcgctattgcaggaaatgttcgac
gaagcgctgagttttcgccgggcgctggccaatttgcgtcagcacatcgccgctgacgat
tggtggttttccatctggcagccgccatcggtggaaggcatcgaccgcgtgatcaccgat
gactggctgctgcagcccgatgccgactggcacggctttggcggcgtgaccgacgactac
gtgctgcttgatccgatcaaggtcacgctggtgatgccgggcctgacggcaggcggggcc
ctcagccagcgcggaattccggcagcggtggtcagcaaattcctttgggaacgtggcttg
gtcgttgaaaagaccgggctgtattcgttcctggtgctgttctcgatgggcatcaccaaa
ggcaaatggagcacgttgctgaccgagttgctggaattcaagcgcagctacgatgccaat
gtcagtctcgcgacctgcctgccgtgcgtggcacaagaggatgtcgcgcgctatcagggc
atgggattgcgcgatctgtgcgatcaactgcacgcctgctatcgcagcaatgccacggcc
aaacacctgaagcgcatgtacaccgtgctcccggaaatcgccatgaagccatctgacgcc
tatgatcaattagtgcgtggcgaggttgaagcggtgtcgatcgatgctctggacgggcgg
atcgccgcagtgatgctggtgccgtacccgccggggattccgttgatcatgcccggcgag
cgttttaccgagtcgacgcgctcgattatcgattacctggcgtttgcccgtacgttcgac
agcagcttcccggggtttgtcgctgatgtgcacggcttgcaacacgaagatgagggcaat
ggacggctatataccgtcgattgcatcaaggaatga
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