Pseudomonas frederiksbergensis: PFAS1_27155
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Entry
PFAS1_27155 CDS
T04786
Name
(GenBank) XRE family transcriptional regulator
KO
K10778
AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:
2.1.1.63
]
Organism
pfk
Pseudomonas frederiksbergensis
Brite
KEGG Orthology (KO) [BR:
pfk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfk03000
]
PFAS1_27155
03400 DNA repair and recombination proteins [BR:
pfk03400
]
PFAS1_27155
Enzymes [BR:
pfk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.63 methylated-DNA---[protein]-cysteine S-methyltransferase
PFAS1_27155
Transcription factors [BR:
pfk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PFAS1_27155
DNA repair and recombination proteins [BR:
pfk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PFAS1_27155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_binding_1
Ada_Zn_binding
HTH_18
Methyltransf_1N
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
APV42809
LinkDB
All DBs
Position
5829845..5830927
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AA seq
360 aa
AA seq
DB search
MNLQNTLLPPHAEMVRAMLERDTAYEGVFFTAVKTTGIFCRPSCTARKPKPENVEFFAHA
DECMSAGYRACLRCKPLDAAAFAPDWVQQLLKSVDADPEQRWTDAQLLAEGIEPLKLRRW
FKQHFGMTFHAWLRTRRLGMALGGIKQGESIDNAAFDSGYESLSGFRDAFQKSFNITPGR
AGNSEPLLFTRLTTPLGPMIAMAERRGLVLLEFLDRPALTKEVEELQNRYGYAVAPGHNA
HLQQIEAELTEYFAGKLTDFNVPLHLPGSDFARQVWAELAKIPYGQTSTYGAIAALLGKP
GASRAVGLANGHNRLSIVVPCHRVIGADGSLTGYGGGQPRKAFLLRLEKAAVQITQQLAF
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaacctacaaaacactttgcttccgccccacgccgagatggttcgcgccatgctcgaa
cgagacaccgcctatgagggggtgttctttaccgcggtcaaaaccaccggcatcttctgt
cgccccagttgcacggcgcgcaagccgaaaccggagaacgtcgagttcttcgcccatgcc
gatgaatgcatgtcggccggctaccgcgcctgtctgcgttgcaaaccactggacgcggcg
gcctttgcaccggactgggtacagcagctgctcaaatcggtggatgccgaccccgagcag
cgctggaccgatgcccagttgctggccgaaggcatcgaaccactgaaactgcgccgctgg
ttcaagcagcatttcggcatgacctttcacgcctggctgcgcacccgacgcctcggtatg
gcgttaggcgggatcaaacagggcgaatccatcgacaacgccgcgttcgattcgggctac
gagtctctgagcgggtttcgcgatgcgtttcaaaagtccttcaacatcacgcccggccgc
gccggcaacagcgaaccactgctgttcacgcgcctgaccacaccgctggggccgatgatc
gccatggccgagcgccgcgggctggtgctgctggagtttcttgatcgaccagcgctgacc
aaggaagtcgaagaactgcagaatcgatacggctacgcggttgcgccaggacataacgcg
catttgcagcagattgaagccgaactgaccgagtatttcgccggaaaactcactgacttc
aacgttccactacacttgcctggcagcgatttcgcccgacaggtctgggccgaactggcg
aagatcccgtacggccagaccagcacctacggcgccattgcggcgttattgggcaagccc
ggcgccagtcgcgccgtgggcctggccaacgggcataaccgtctctcgattgttgtgccc
tgtcaccgggtgatcggcgctgacggctcgctgaccggctatggtggaggacaaccgcgt
aaggcgttcctgctcaggctggaaaaagcagcggtgcagatcacgcaacaactcgcattc
tga
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